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-rw-r--r--sci-libs/lapack-atlas/ChangeLog7
-rw-r--r--sci-libs/lapack-atlas/files/digest-lapack-atlas-3.7.116
-rw-r--r--sci-libs/lapack-atlas/files/digest-lapack-atlas-3.7.11-r16
-rw-r--r--sci-libs/lapack-atlas/lapack-atlas-3.7.11-r1.ebuild15
-rw-r--r--sci-libs/lapack-atlas/lapack-atlas-3.7.11.ebuild15
5 files changed, 36 insertions, 13 deletions
diff --git a/sci-libs/lapack-atlas/ChangeLog b/sci-libs/lapack-atlas/ChangeLog
index 083524a2b224..07eb2e61ca73 100644
--- a/sci-libs/lapack-atlas/ChangeLog
+++ b/sci-libs/lapack-atlas/ChangeLog
@@ -1,6 +1,11 @@
# ChangeLog for sci-libs/lapack-atlas
# Copyright 2004-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-libs/lapack-atlas/ChangeLog,v 1.13 2006/07/03 08:07:37 spyderous Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-libs/lapack-atlas/ChangeLog,v 1.14 2006/07/27 00:18:07 markusle Exp $
+
+ 26 Jul 2006; Markus Dittrich <markusle@gentoo.org>
+ lapack-atlas-3.7.11.ebuild, lapack-atlas-3.7.11-r1.ebuild:
+ Updated shared-libs patchset to resolve issues due to missing
+ pthread symbols on multiprocessor machines (see #137877).
*lapack-atlas-3.7.11-r1 (03 Jul 2006)
*lapack-atlas-3.6.0-r2 (03 Jul 2006)
diff --git a/sci-libs/lapack-atlas/files/digest-lapack-atlas-3.7.11 b/sci-libs/lapack-atlas/files/digest-lapack-atlas-3.7.11
index 2e69d8d6ba74..d855f1d18820 100644
--- a/sci-libs/lapack-atlas/files/digest-lapack-atlas-3.7.11
+++ b/sci-libs/lapack-atlas/files/digest-lapack-atlas-3.7.11
@@ -1,6 +1,6 @@
-MD5 d2940721d6592f43a5d2e7740d13076d atlas3.6.0-shared-libs.1.patch.bz2 5148
-RMD160 96f9357049fb22e0955ff1375630e542b0bdee7c atlas3.6.0-shared-libs.1.patch.bz2 5148
-SHA256 f669030bf042808a4f4a92c746f3fd3067597d0ec94756ecac63bc331109c565 atlas3.6.0-shared-libs.1.patch.bz2 5148
+MD5 b73bec84950814bd9b62990de180f652 atlas3.6.0-shared-libs.2.patch.bz2 59340
+RMD160 78afe21c52617b7f9681d15052972594432d8650 atlas3.6.0-shared-libs.2.patch.bz2 59340
+SHA256 0f5d954b80d8a3b84b86924beb386ca45d6426f1ae0c616d02930ae6d8bc0e74 atlas3.6.0-shared-libs.2.patch.bz2 59340
MD5 ccde41dd4f41c47e16ebfa8e6dfd1117 atlas3.7.11.tar.bz2 2032724
RMD160 f58b8a85c097bd1bff6a53ee42bcff97240fb8ec atlas3.7.11.tar.bz2 2032724
SHA256 558b9f3f0dc8f63306f99f75d6e6fa762ea3d9d0dea88053e3e8b6f0e6364109 atlas3.7.11.tar.bz2 2032724
diff --git a/sci-libs/lapack-atlas/files/digest-lapack-atlas-3.7.11-r1 b/sci-libs/lapack-atlas/files/digest-lapack-atlas-3.7.11-r1
index 2e69d8d6ba74..d855f1d18820 100644
--- a/sci-libs/lapack-atlas/files/digest-lapack-atlas-3.7.11-r1
+++ b/sci-libs/lapack-atlas/files/digest-lapack-atlas-3.7.11-r1
@@ -1,6 +1,6 @@
-MD5 d2940721d6592f43a5d2e7740d13076d atlas3.6.0-shared-libs.1.patch.bz2 5148
-RMD160 96f9357049fb22e0955ff1375630e542b0bdee7c atlas3.6.0-shared-libs.1.patch.bz2 5148
-SHA256 f669030bf042808a4f4a92c746f3fd3067597d0ec94756ecac63bc331109c565 atlas3.6.0-shared-libs.1.patch.bz2 5148
+MD5 b73bec84950814bd9b62990de180f652 atlas3.6.0-shared-libs.2.patch.bz2 59340
+RMD160 78afe21c52617b7f9681d15052972594432d8650 atlas3.6.0-shared-libs.2.patch.bz2 59340
+SHA256 0f5d954b80d8a3b84b86924beb386ca45d6426f1ae0c616d02930ae6d8bc0e74 atlas3.6.0-shared-libs.2.patch.bz2 59340
MD5 ccde41dd4f41c47e16ebfa8e6dfd1117 atlas3.7.11.tar.bz2 2032724
RMD160 f58b8a85c097bd1bff6a53ee42bcff97240fb8ec atlas3.7.11.tar.bz2 2032724
SHA256 558b9f3f0dc8f63306f99f75d6e6fa762ea3d9d0dea88053e3e8b6f0e6364109 atlas3.7.11.tar.bz2 2032724
diff --git a/sci-libs/lapack-atlas/lapack-atlas-3.7.11-r1.ebuild b/sci-libs/lapack-atlas/lapack-atlas-3.7.11-r1.ebuild
index a7e1d55a51a8..14bdd963bfec 100644
--- a/sci-libs/lapack-atlas/lapack-atlas-3.7.11-r1.ebuild
+++ b/sci-libs/lapack-atlas/lapack-atlas-3.7.11-r1.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2006 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-libs/lapack-atlas/lapack-atlas-3.7.11-r1.ebuild,v 1.1 2006/07/03 08:07:37 spyderous Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-libs/lapack-atlas/lapack-atlas-3.7.11-r1.ebuild,v 1.2 2006/07/27 00:18:07 markusle Exp $
inherit eutils flag-o-matic toolchain-funcs fortran
@@ -13,7 +13,7 @@ SRC_URI2="http://www.netlib.org/lapack/lapack.tgz"
SRC_URI="${SRC_URI1} ${SRC_URI2}
mirror://gentoo/lapack-20020531-20021004.patch.bz2
mirror://gentoo/lapack-gentoo.patch
- mirror://gentoo/${MY_PN}3.6.0-shared-libs.1.patch.bz2"
+ mirror://gentoo/${MY_PN}3.6.0-shared-libs.2.patch.bz2"
SLOT="0"
IUSE="ifc doc"
@@ -65,7 +65,7 @@ src_unpack() {
cd "${WORKDIR}"
epatch "${FILESDIR}"/unbuffered.patch
epatch "${FILESDIR}"/${PV}-allow-any-gcc-version.patch
- epatch "${DISTDIR}"/atlas3.6.0-shared-libs.1.patch.bz2
+ epatch "${DISTDIR}"/atlas3.6.0-shared-libs.2.patch.bz2
epatch "${DISTDIR}"/lapack-20020531-20021004.patch.bz2
epatch "${DISTDIR}"/lapack-gentoo.patch
cp "${FILESDIR}"/war "${S}"
@@ -85,6 +85,15 @@ src_unpack() {
${S}/makes/Make.lib \
|| die "Failed to update for gcc-4"
fi
+
+ # make sure shared libs link against proper libraries
+ if [[ ${FORTRANC} == "gfortran" ]]; then
+ libs="-lpthread -lgfortran"
+ else
+ libs="-lpthread -lg2c"
+ fi
+ sed -e "s/SHRD_LNK/${libs}/g" -i ${S}/Make.top || \
+ die "Failed to add addtional libs to shared object build"
}
atlas_fail() {
diff --git a/sci-libs/lapack-atlas/lapack-atlas-3.7.11.ebuild b/sci-libs/lapack-atlas/lapack-atlas-3.7.11.ebuild
index 8e7d5e517938..fe21e0c5cbd5 100644
--- a/sci-libs/lapack-atlas/lapack-atlas-3.7.11.ebuild
+++ b/sci-libs/lapack-atlas/lapack-atlas-3.7.11.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2006 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-libs/lapack-atlas/lapack-atlas-3.7.11.ebuild,v 1.3 2006/04/01 19:59:44 agriffis Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-libs/lapack-atlas/lapack-atlas-3.7.11.ebuild,v 1.4 2006/07/27 00:18:07 markusle Exp $
inherit eutils flag-o-matic toolchain-funcs fortran
@@ -13,7 +13,7 @@ SRC_URI2="http://www.netlib.org/lapack/lapack.tgz"
SRC_URI="${SRC_URI1} ${SRC_URI2}
mirror://gentoo/lapack-20020531-20021004.patch.bz2
mirror://gentoo/lapack-gentoo.patch
- mirror://gentoo/${MY_PN}3.6.0-shared-libs.1.patch.bz2"
+ mirror://gentoo/${MY_PN}3.6.0-shared-libs.2.patch.bz2"
SLOT="0"
IUSE="ifc doc"
@@ -66,7 +66,7 @@ src_unpack() {
cd "${WORKDIR}"
epatch "${FILESDIR}"/unbuffered.patch
epatch "${FILESDIR}"/${PV}-allow-any-gcc-version.patch
- epatch "${DISTDIR}"/atlas3.6.0-shared-libs.1.patch.bz2
+ epatch "${DISTDIR}"/atlas3.6.0-shared-libs.2.patch.bz2
epatch "${DISTDIR}"/lapack-20020531-20021004.patch.bz2
epatch "${DISTDIR}"/lapack-gentoo.patch
cp "${FILESDIR}"/war "${S}"
@@ -86,6 +86,15 @@ src_unpack() {
${S}/makes/Make.lib \
|| die "Failed to update for gcc-4"
fi
+
+ # make sure shared libs link against proper libraries
+ if [[ ${FORTRANC} == "gfortran" ]]; then
+ libs="-lpthread -lgfortran"
+ else
+ libs="-lpthread -lg2c"
+ fi
+ sed -e "s/SHRD_LNK/${libs}/g" -i ${S}/Make.top || \
+ die "Failed to add addtional libs to shared object build"
}
atlas_fail() {