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* Bump to most recent modification date on upstream's unversioned tarball. ↵Donnie Berkholz2006-03-081-4/+22
| | | | | | Fixes problem with file-open dialog not finding files, among others. (Portage version: 2.1_pre5-r2) (Unsigned Manifest commit)
* Bump to most recent modification date on upstream's unversioned tarball. ↵Donnie Berkholz2006-03-083-2/+43
| | | | | | Fixes problem with file-open dialog not finding files, among others. (Portage version: 2.1_pre5-r2)
* Bump.Donnie Berkholz2006-03-071-4/+22
| | | | (Portage version: 2.1_pre5-r2) (Unsigned Manifest commit)
* Bump.Donnie Berkholz2006-03-073-2/+68
| | | | (Portage version: 2.1_pre5-r2)
* Mark 2.2.0 ~ia64. #123622Aron Griffis2006-02-231-0/+10
| | | | | (Portage version: 2.0.54) (Signed Manifest commit)
* Mark 2.2.0 ~ia64. #123622Aron Griffis2006-02-231-2/+2
| | | | | (Portage version: 2.0.54) (Unsigned Manifest commit)
* Mark 2.2.0 ~ia64. #123622Aron Griffis2006-02-233-4/+7
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* Mark 2.3.2-r1 ~ia64Aron Griffis2006-02-231-0/+10
| | | | | (Portage version: 2.0.54) (Signed Manifest commit)
* Mark 2.3.2-r1 ~ia64Aron Griffis2006-02-231-2/+2
| | | | | (Portage version: 2.0.54) (Unsigned Manifest commit)
* Mark 2.3.2-r1 ~ia64Aron Griffis2006-02-233-4/+7
| | | | (Portage version: 2.0.54)
* Marked ppc-macos stable (bug #123333)Fabian Groffen2006-02-221-6/+6
| | | | | (Portage version: 2.1_pre4-r1) (Unsigned Manifest commit)
* Marked ppc-macos stable (bug #123333)Fabian Groffen2006-02-223-16/+9
| | | | (Portage version: 2.1_pre4-r1)
* Marked ppc-macos stable (bug #123332)Fabian Groffen2006-02-222-32/+12
| | | | | (Portage version: 2.1_pre4-r1) (Unsigned Manifest commit)
* Marked ppc-macos stable (bug #123332)Fabian Groffen2006-02-224-6/+12
| | | | (Portage version: 2.1_pre4-r1)
* Marked ppc-macos stable (bug #123334)Fabian Groffen2006-02-221-16/+6
| | | | | (Portage version: 2.1_pre4-r1) (Unsigned Manifest commit)
* Marked ppc-macos stable (bug #123334)Fabian Groffen2006-02-222-3/+6
| | | | (Portage version: 2.1_pre4-r1)
* Stable on ppc. bug 123334Gysbert Wassenaar2006-02-221-0/+10
| | | | | (Portage version: 2.1_pre4-r1) (Signed Manifest commit)
* Stable on ppc. bug 123334Gysbert Wassenaar2006-02-221-2/+26
| | | | | (Portage version: 2.1_pre4-r1) (Unsigned Manifest commit)
* Stable on ppc. bug 123334Gysbert Wassenaar2006-02-222-3/+6
| | | | (Portage version: 2.1_pre4-r1)
* Stable on ppc. bug 123332Gysbert Wassenaar2006-02-222-0/+20
| | | | | (Portage version: 2.1_pre4-r1) (Signed Manifest commit)
* Stable on ppc. bug 123332Gysbert Wassenaar2006-02-222-4/+36
| | | | | (Portage version: 2.1_pre4-r1) (Unsigned Manifest commit)
* Stable on ppc. bug 123332Gysbert Wassenaar2006-02-224-6/+12
| | | | (Portage version: 2.1_pre4-r1)
* Stable on ppc. bug 123333Gysbert Wassenaar2006-02-221-0/+10
| | | | | (Portage version: 2.1_pre4-r1) (Signed Manifest commit)
* Stable on ppc. bug 123333Gysbert Wassenaar2006-02-221-2/+18
| | | | | (Portage version: 2.1_pre4-r1) (Unsigned Manifest commit)
* Stable on ppc. bug 123333Gysbert Wassenaar2006-02-222-3/+6
| | | | (Portage version: 2.1_pre4-r1)
* New multiple sequence alignment package. Perhaps the most accurate and ↵Donnie Berkholz2006-02-211-27/+9
| | | | | | | fastest local aligner. (Portage version: 2.1_pre4-r1) (Unsigned Manifest commit)
* New multiple sequence alignment package. Perhaps the most accurate and ↵Donnie Berkholz2006-02-215-0/+92
| | | | | | fastest local aligner. (Portage version: 2.1_pre4-r1)
* New multiple sequence alignment package. Probably the best global aligner, ↵Donnie Berkholz2006-02-211-21/+9
| | | | | | | although it runs slower. Takes 5-10 times longer than clustalw, but about half as long as t-coffee. (Portage version: 2.1_pre4-r1) (Unsigned Manifest commit)
* New multiple sequence alignment package. Probably the best global aligner, ↵Donnie Berkholz2006-02-216-0/+116
| | | | | | although it runs slower. Takes 5-10 times longer than clustalw, but about half as long as t-coffee. (Portage version: 2.1_pre4-r1)
* New multiple sequence alignment package. Provides a great tradeoff between ↵Donnie Berkholz2006-02-211-24/+9
| | | | | | | runtime and quality for global alignments; quite a bit worse on local alignments. (Portage version: 2.1_pre4-r1) (Unsigned Manifest commit)
* New multiple sequence alignment package. Provides a great tradeoff between ↵Donnie Berkholz2006-02-215-0/+89
| | | | | | runtime and quality for global alignments; quite a bit worse on local alignments. (Portage version: 2.1_pre4-r1)
* Stable on ppc64; bug #123333Markus Rothe2006-02-211-28/+2
| | | | | (Portage version: 2.0.54) (Unsigned Manifest commit)
* Stable on ppc64; bug #123333Markus Rothe2006-02-212-3/+6
| | | | (Portage version: 2.0.54)
* Stable on ppc64; bug #123332Markus Rothe2006-02-212-56/+4
| | | | | (Portage version: 2.0.54) (Unsigned Manifest commit)
* Stable on ppc64; bug #123332Markus Rothe2006-02-214-6/+12
| | | | (Portage version: 2.0.54)
* Stable on ppc64; bug #123334Markus Rothe2006-02-211-36/+2
| | | | | (Portage version: 2.0.54) (Unsigned Manifest commit)
* Stable on ppc64; bug #123334Markus Rothe2006-02-212-3/+6
| | | | (Portage version: 2.0.54)
* Stable on x86; bug #123332Joshua Jackson2006-02-212-0/+20
| | | | | (Portage version: 2.1_pre4-r1) (Signed Manifest commit)
* Stable on x86; bug #123332Joshua Jackson2006-02-212-4/+36
| | | | | (Portage version: 2.1_pre4-r1) (Unsigned Manifest commit)
* Stable on x86; bug #123332Joshua Jackson2006-02-214-6/+12
| | | | (Portage version: 2.1_pre4-r1)
* Stable on x86; bug #123334Joshua Jackson2006-02-211-0/+10
| | | | | (Portage version: 2.1_pre4-r1) (Signed Manifest commit)
* Stable on x86; bug #123334Joshua Jackson2006-02-211-2/+26
| | | | | (Portage version: 2.1_pre4-r1) (Unsigned Manifest commit)
* Stable on x86; bug #123334Joshua Jackson2006-02-212-3/+6
| | | | (Portage version: 2.1_pre4-r1)
* stable on x86; bug #123333Joshua Jackson2006-02-211-0/+10
| | | | | (Portage version: 2.1_pre4-r1) (Signed Manifest commit)
* stable on x86; bug #123333Joshua Jackson2006-02-211-3/+19
| | | | | (Portage version: 2.1_pre4-r1) (Unsigned Manifest commit)
* stable on x86; bug #123333Joshua Jackson2006-02-212-5/+8
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* Added old version for multiprocessor environementsOlivier Fisette2006-02-191-2/+2
| | | | | (Portage version: 2.0.54) (Unsigned Manifest commit)
* Added old version for multiprocessor environementsOlivier Fisette2006-02-194-1/+75
| | | | (Portage version: 2.0.54)
* Block old versions of pscan to avoid file collisions (see bug #116236)Olivier Fisette2006-02-191-2/+2
| | | | | (Portage version: 2.0.54) (Unsigned Manifest commit)
* Block old versions of pscan to avoid file collisions (see bug #116236)Olivier Fisette2006-02-192-3/+7
| | | | (Portage version: 2.0.54)