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* New package to add hydrogens to a Protein Data Bank (PDB) molecule structure ↵Donnie Berkholz2006-06-041-8/+8
| | | | | | | file. (Portage version: 2.1_rc3-r1) (Unsigned Manifest commit)
* New package to add hydrogens to a Protein Data Bank (PDB) molecule structure ↵Donnie Berkholz2006-06-046-0/+207
| | | | | | file. (Portage version: 2.1_rc3-r1)
* New program that evaluates atomic packing within or between molecules.Donnie Berkholz2006-06-041-8/+8
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* New program that evaluates atomic packing within or between molecules.Donnie Berkholz2006-06-045-0/+77
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* New package for ab initio calculations using density functional theory. ↵Donnie Berkholz2006-06-041-8/+8
| | | | | | | Requires gcc 4.1 to build, which is why I haven't added it until now. (Portage version: 2.1_rc3-r1) (Unsigned Manifest commit)
* New package for ab initio calculations using density functional theory. ↵Donnie Berkholz2006-06-049-0/+241
| | | | | | Requires gcc 4.1 to build, which is why I haven't added it until now. (Portage version: 2.1_rc3-r1)
* Bump to latest. Fix for gcc4 by linking against libf2c in the non-gcc3 case. ↵Donnie Berkholz2006-06-031-3/+23
| | | | | | | Keyword ~ppc. (Portage version: 2.1_rc3-r1) (Unsigned Manifest commit)
* Bump to latest. Fix for gcc4 by linking against libf2c in the non-gcc3 case. ↵Donnie Berkholz2006-06-033-2/+82
| | | | | | Keyword ~ppc. (Portage version: 2.1_rc3-r1)
* Fix crackrock SRC_URI, reported by Brian Harring.Donnie Berkholz2006-05-311-8/+8
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* Fix crackrock SRC_URI, reported by Brian Harring.Donnie Berkholz2006-05-312-3/+6
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* Moved path variable declarations from the wrapper to an env.d fileOlivier Fisette2006-05-261-2/+2
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* Moved path variable declarations from the wrapper to an env.d fileOlivier Fisette2006-05-264-1/+91
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* Added patch to enable compilation with gcc-4.1.Markus Dittrich2006-05-231-13/+17
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* Added patch to enable compilation with gcc-4.1.Markus Dittrich2006-05-233-4/+31
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* Removed ifc use flag and replaced it with fortran.eclass logicMarkus Dittrich2006-05-231-22/+22
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* Removed ifc use flag and replaced it with fortran.eclass logicMarkus Dittrich2006-05-232-26/+23
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* Keyword ~ppc.Donnie Berkholz2006-05-211-8/+8
| | | | | (Portage version: 2.1_rc1-r2) (Unsigned Manifest commit)
* Keyword ~ppc.Donnie Berkholz2006-05-212-3/+6
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* (#114260) Bump. Supports openbabel-2.Donnie Berkholz2006-05-141-4/+12
| | | | | (Portage version: 2.1_pre10-r5) (Unsigned Manifest commit)
* (#114260) Bump. Supports openbabel-2.Donnie Berkholz2006-05-143-1/+44
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* Convert leading spaces to tabs.Donnie Berkholz2006-05-141-12/+12
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* Convert leading spaces to tabs.Donnie Berkholz2006-05-143-11/+15
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* Keyword ~ppc. Also make sure to strip -malign-double on non-x86 systems.Donnie Berkholz2006-05-141-12/+28
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* Keyword ~ppc. Also make sure to strip -malign-double on non-x86 systems.Donnie Berkholz2006-05-142-3/+12
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* Bump. This version does a much better job of finding stuff, and the pymol ↵Donnie Berkholz2006-05-141-2/+24
| | | | | | | plugin's a lot more capable. (Portage version: 2.1_pre10-r5) (Unsigned Manifest commit)
* Bump. This version does a much better job of finding stuff, and the pymol ↵Donnie Berkholz2006-05-143-2/+64
| | | | | | plugin's a lot more capable. (Portage version: 2.1_pre10-r5)
* (#133254) New homepage.Donnie Berkholz2006-05-141-20/+20
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* (#133254) New homepage.Donnie Berkholz2006-05-145-11/+15
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* Pull old development versions.Donnie Berkholz2006-05-139-178/+4
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* Pull old development versions.Donnie Berkholz2006-05-131-1/+8
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* (#132835) Bump to latest release. Ebuild based on work of Donald E. Curtis.Donnie Berkholz2006-05-131-4/+12
| | | | | (Portage version: 2.1_pre10-r5) (Unsigned Manifest commit)
* (#132835) Bump to latest release. Ebuild based on work of Donald E. Curtis.Donnie Berkholz2006-05-133-1/+60
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* Always build shared libraries, so other programs can link against them ↵Donnie Berkholz2006-05-131-18/+37
| | | | | | | without mixing PIC and non-PIC code. That breaks architectures including ppc, ppc64, amd64. Do some general ebuild cleanup, and add an RDEPEND so not all the build-time tools are required at runtime. (Portage version: 2.1_pre10-r5) (Unsigned Manifest commit)
* Always build shared libraries, so other programs can link against them ↵Donnie Berkholz2006-05-133-1/+115
| | | | | | without mixing PIC and non-PIC code. That breaks architectures including ppc, ppc64, amd64. Do some general ebuild cleanup, and add an RDEPEND so not all the build-time tools are required at runtime. (Portage version: 2.1_pre10-r5)
* Fix parallel build. Remove the really ugly LDFLAGS hack, it's no longer ↵Donnie Berkholz2006-05-131-4/+29
| | | | | | | needed. Cleaner installation of executable and wrapper. (Portage version: 2.1_pre10-r5) (Unsigned Manifest commit)
* Fix parallel build. Remove the really ugly LDFLAGS hack, it's no longer ↵Donnie Berkholz2006-05-134-2/+64
| | | | | | needed. Cleaner installation of executable and wrapper. (Portage version: 2.1_pre10-r5)
* Bump. Many of the changes are internal, to help adding new translators etc. ↵Donnie Berkholz2006-05-131-11/+21
| | | | | | | Also adds support for Perl and Python scripting, better batch conversion, support for reading gzipped files and support for InChI identifiers. (Portage version: 2.1_pre10-r5) (Unsigned Manifest commit)
* Bump. Many of the changes are internal, to help adding new translators etc. ↵Donnie Berkholz2006-05-133-2/+33
| | | | | | Also adds support for Perl and Python scripting, better batch conversion, support for reading gzipped files and support for InChI identifiers. (Portage version: 2.1_pre10-r5)
* Update openbabel dep for adding openbabel-2 to the tree.Donnie Berkholz2006-05-131-5/+35
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* Update openbabel dep for adding openbabel-2 to the tree.Donnie Berkholz2006-05-135-14/+19
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* Update openbabel dep for adding openbabel-2 to the tree.Donnie Berkholz2006-05-131-7/+61
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* Update openbabel dep for adding openbabel-2 to the tree.Donnie Berkholz2006-05-132-5/+8
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* Removed alpha version. Require PyMOL version under 0.99.Olivier Fisette2006-05-101-4/+2
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* Removed alpha version. Require PyMOL version under 0.99.Olivier Fisette2006-05-104-24/+7
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* Stable on ppc64; bug #89969Markus Rothe2006-05-071-2/+2
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* Stable on ppc64; bug #89969Markus Rothe2006-05-072-5/+8
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* Fix SHA256 digests.Marien Zwart2006-04-291-12/+31
| | | | | (Portage version: 2.1_pre9-r5) (Signed Manifest commit)
* Fix SHA256 digests.Marien Zwart2006-04-291-1/+4
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* Fixing SHA256 digest, pass fourAlec Warner2006-04-271-13/+20
| | | | | (Portage version: 2.1_pre9-r4) (Unsigned Manifest commit)
* Fixing SHA256 digest, pass fourAlec Warner2006-04-272-1/+7
| | | | (Portage version: 2.1_pre9-r4)