# ChangeLog for sci-biology/hmmer # Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2 # $Header: /var/cvsroot/gentoo-x86/sci-biology/hmmer/ChangeLog,v 1.36 2012/06/28 16:50:49 jlec Exp $ 28 Jun 2012; Justin Lecher hmmer-3.0.ebuild, -files/hmmer-3.0-perl-5.16.patch: Fix the patch, thanks xarthisius and bonsaikitten for help 28 Jun 2012; Justin Lecher files/hmmer-3.0-perl-5.16.patch: Fix patch, screwed VCS tags, #423983 25 Jun 2012; Justin Lecher hmmer-3.0.ebuild, +files/hmmer-3.0-perl-5.16.patch, metadata.xml: Fix for build with perl-5.16, #421799; handle static-libs 18 Jul 2010; Christian Faulhammer hmmer-3.0.ebuild: stable x86, bug 328419 18 Jul 2010; Kacper Kowalik hmmer-2.3.2-r1.ebuild, hmmer-2.3.2-r2.ebuild, hmmer-3.0.ebuild, +files/hmmer-3.0-fix_tests.patch: Fix tests that use gsl. Make repoman happy. 16 Jul 2010; Markos Chandras hmmer-3.0.ebuild: Stable on amd64 wrt bug #328419 *hmmer-3.0 (28 Mar 2010) 28 Mar 2010; Andrey Kislyuk -hmmer-3.0_beta2.ebuild, +hmmer-3.0.ebuild: Version bump 01 Jan 2010; Christian Faulhammer hmmer-3.0_beta2.ebuild: Transfer Prefix keywords *hmmer-3.0_beta2 (30 Aug 2009) 30 Aug 2009; Andrey Kislyuk +hmmer-3.0_beta2.ebuild: Bump and add parallel make workaround, bug 282813 *hmmer-3.0_beta1 (21 Jun 2009) 21 Jun 2009; Andrey Kislyuk -hmmer-3.0_alpha2.ebuild, +hmmer-3.0_beta1.ebuild: Version bump *hmmer-3.0_alpha2 (02 May 2009) 02 May 2009; Andrey Kislyuk +hmmer-3.0_alpha2.ebuild: Version bump (pre-release) 06 Aug 2008; Ulrich Mueller metadata.xml: Add USE flag description to metadata wrt GLEP 56. 07 Feb 2008; Fabian Groffen hmmer-2.3.2-r1.ebuild, hmmer-2.3.2-r2.ebuild: Dropped ppc-macos keyword, see you in prefix 02 Jan 2008; Raúl Porcel hmmer-2.3.2-r2.ebuild: Re-add ~ia64 13 Nov 2007; Raúl Porcel hmmer-2.3.2-r2.ebuild: Add ~alpha 22 May 2007; Olivier Fisette hmmer-2.3.2-r1.ebuild, hmmer-2.3.2-r2.ebuild: Updated home page. Stabilised bug-fix release on x86 and amd64. 22 Feb 2007; Markus Ullmann ChangeLog: Redigest for Manifest2 14 Sep 2006; Olivier Fisette metadata.xml: Stepping down from maintaining this package. 07 May 2006; Markus Rothe hmmer-2.3.2-r2.ebuild: Stable on ppc64 06 Apr 2006; Thomas Cort hmmer-2.3.2-r1.ebuild: Added ~alpha keyword. 29 Mar 2006; Aron Griffis hmmer-2.3.2-r1.ebuild: Mark 2.3.2-r1 stable on ia64 23 Feb 2006; Aron Griffis hmmer-2.3.2-r1.ebuild: Mark 2.3.2-r1 ~ia64 24 Jan 2006; Markus Rothe hmmer-2.3.2-r2.ebuild: Added ~ppc64; bug #119723 21 Jan 2006; Olivier Fisette -files/Makefile-hmmer-2.2g.patch, -hmmer-2.3.2.ebuild: Removed obsolete version. *hmmer-2.3.2-r2 (21 Jan 2006) 21 Jan 2006; Olivier Fisette +hmmer-2.3.2-r2.ebuild: Fixed compilation problem on ppc64 (see bug #119723). 04 Jan 2006; Olivier Fisette hmmer-2.3.2-r1.ebuild: Do not depend on "virtual/libc" (package not in system target). 19 Sep 2005; Olivier Fisette metadata.xml: Maintainer changed from Stephen Diener (MIA) to Olivier Fisette. 26 Aug 2005; Carlos Silva hmmer-2.3.2-r1.ebuild: Marked amd64 21 May 2005; Jason Wever hmmer-2.3.2-r1.ebuild: Added ~sparc keyword. 13 May 2005; Olivier Fisette hmmer-2.3.2-r1.ebuild: Added to x86. *hmmer-2.3.2-r1 (06 Mar 2005) 06 Mar 2005; Olivier Fisette +hmmer-2.3.2-r1.ebuild: Install header files, support for LFS, optional support for PVM and threads. 07 Feb 2005; hmmer-2.3.2.ebuild: Marked amd64. *hmmer-2.3.2 (23 Dec 2004) 23 Dec 2004; Olivier Fisette +metadata.xml, +files/Makefile-hmmer-2.2g.patch, +hmmer-2.3.2.ebuild: Moved from app-sci/hmmer to sci-biology/hmmer. 31 Oct 2004; Olivier Fisette -hmmer-2.3.1.ebuild, hmmer-2.3.2.ebuild: Added 2.3.2 to x86. Removed old version. 17 Oct 2004; David Holm hmmer-2.3.2.ebuild: Added to ~ppc. 14 Oct 2004; Hasan Khalil hmmer-2.3.2.ebuild: Keyworded ~ppc-macos. *hmmer-2.3.2 (29 Sep 2004) 29 Sep 2004; Olivier Fisette -hmmer-2.2g.ebuild, +hmmer-2.3.2.ebuild: New version 2.3.2. Removed old version. 18 Nov 2003; Stephen Diener hmmer-2.3.1.ebuild: ~x86 -> x86 *hmmer-2.3.1 (28 Aug 2003) 28 Aug 2003; hmmer-2.3.1.ebuild: Version bump *hmmer-2.2g (07 May 2003) 07 May 2003; Jon Portnoy hmmer-2.2g.ebuild : Initial import. Ebuild submitted by Steve Diener and Gontran Zepeda in bug #20449.