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* sci-libs/pdal: Stabilize 2.5.3-r1 amd64, #918440Joonas Niilola2023-12-051-1/+1
| | | | Signed-off-by: Joonas Niilola <juippis@gentoo.org>
* sci-libs/onnx: add 1.14.1Alfredo Tupone2023-12-032-0/+61
| | | | Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-libs/gloo: add 2023.05.19Alfredo Tupone2023-12-032-0/+66
| | | | Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-libs/vtk: require <sci-libs/pdal-2.6.0Paul Zander2023-12-012-2/+2
| | | | | | | | | | | | Broken, needs further work, limit for now. https://gitlab.kitware.com/vtk/vtk/-/issues/19158 Bug: https://bugs.gentoo.org/918898 Signed-off-by: Paul Zander <negril.nx+gentoo@gmail.com> Closes: https://github.com/gentoo/gentoo/pull/34069 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/caffe2: drop 2.0.1-r4Alfredo Tupone2023-12-011-212/+0
| | | | Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-libs/caffe2: install nvfuser and functorch filesAlfredo Tupone2023-12-012-0/+238
| | | | | Closes: https://bugs.gentoo.org/914572 Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-libs/metis: Keyword 5.2.1-r2 hppa, #905468Matoro Mahri2023-12-011-1/+1
| | | | | Signed-off-by: Matoro Mahri <matoro_gentoo@matoro.tk> Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gklib: Keyword 5.1.1_p20230327-r1 hppa, #905468Matoro Mahri2023-12-011-1/+1
| | | | | Signed-off-by: Matoro Mahri <matoro_gentoo@matoro.tk> Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/symengine: Stabilize 0.11.1 amd64, #918862Arthur Zamarin2023-11-291-1/+1
| | | | Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
* sci-libs/symengine: Stabilize 0.11.1 arm64, #918862Michał Górny2023-11-291-1/+1
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/pdal: bump version to 2.6.0Thomas Bettler2023-11-292-0/+61
| | | | | | Signed-off-by: Thomas Bettler <thomas.bettler@gmail.com> Closes: https://github.com/gentoo/gentoo/pull/33975 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/gloo: fix ssl3 buildAlfredo Tupone2023-11-272-0/+20
| | | | | Bug: https://bugs.gentoo.org/913685 Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-libs/hipSPARSE: add 5.7.1Benda Xu2023-11-272-0/+99
| | | | | | Do not create symlinks. Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/hipCUB: add 5.7.1Sv. Lockal2023-11-272-0/+72
| | | | | | Bug: https://github.com/gentoo/gentoo/pull/33400 Signed-off-by: Sv. Lockal <lockalsash@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/rocThrust: add 5.7.1Sv. Lockal2023-11-272-0/+77
| | | | | | | enable HMM to increase tests pass rate Signed-off-by: Sv. Lockal <lockalsash@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/rocPRIM: add 5.7.1Sv. Lockal2023-11-273-0/+109
| | | | | | | add 5.7.1 expand-isa-compatibility patch Signed-off-by: Sv. Lockal <lockalsash@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/rocSPARSE: add 5.7.1Sv. Lockal2023-11-272-0/+140
| | | | | Signed-off-by: Sv. Lockal <lockalsash@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/rocSOLVER: add 5.7.1Sv. Lockal2023-11-273-0/+71
| | | | | Signed-off-by: Sv. Lockal <lockalsash@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/hipBLAS: add 5.7.1Sv. Lockal2023-11-273-0/+40
| | | | | Signed-off-by: Sv. Lockal <lockalsash@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/rocBLAS: re-enable tests.Benda Xu2023-11-271-3/+1
| | | | Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/rocBLAS: add 5.7.1Sv. Lockal2023-11-273-0/+242
| | | | | | Closes: https://bugs.gentoo.org/911816 Signed-off-by: Sv. Lockal <lockalsash@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/hipFFT: drop include directory hack.Benda Xu2023-11-272-4/+0
| | | | | | | | | hipFFT-5.7 is FHS compliant. Drop HIP_ROOT_DIR and unused cmake variables, it is only for FindHIP.cmake. Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/openblas: fix USE=index-64bitSam James2023-11-251-5/+5
| | | | | Closes: https://bugs.gentoo.org/917337 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/symengine: Stabilize 0.10.1 arm64, #918179Sam James2023-11-251-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/lapack: add 3.12.0Sam James2023-11-242-0/+108
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/rtree: Stabilize 1.0.0 arm64, #918389Arthur Zamarin2023-11-241-1/+1
| | | | Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
* sci-libs/libspatialindex: Stabilize 1.9.3-r2 arm64, #918388Michał Górny2023-11-241-1/+1
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/xylib: Use wxGTK 3.2Pacho Ramos2023-11-241-0/+43
| | | | | | And provide a proper menu entry Signed-off-by: Pacho Ramos <pacho@gentoo.org>
* sci-libs/plplot: add 5.15.0_p6Pacho Ramos2023-11-242-0/+297
| | | | | | | | | | Apply lots of bugfixes from Debian Closes: https://bugs.gentoo.org/814971 Closes: https://bugs.gentoo.org/828434 Closes: https://bugs.gentoo.org/832513 Closes: https://bugs.gentoo.org/891885 Signed-off-by: Pacho Ramos <pacho@gentoo.org>
* sci-libs/mathgl: add 8.0.1Pacho Ramos2023-11-243-0/+171
| | | | | | | | | | Closes: https://bugs.gentoo.org/587150 Closes: https://bugs.gentoo.org/886468 Closes: https://bugs.gentoo.org/873457 Closes: https://bugs.gentoo.org/808713 Closes: https://bugs.gentoo.org/780318 Closes: https://bugs.gentoo.org/711154 Signed-off-by: Pacho Ramos <pacho@gentoo.org>
* sci-libs/mpfi: update LICENSEMichael Orlitzky2023-11-221-1/+3
| | | | Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-libs/iml: update LICENSEMichael Orlitzky2023-11-221-1/+2
| | | | Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-libs/gdal: Stabilize 3.7.3 x86, #917540Arthur Zamarin2023-11-221-1/+1
| | | | Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
* sci-libs/gdal: Fix build with dev-libs/libxml2-2.12.0Andreas Sturmlechner2023-11-213-0/+50
| | | | | Closes: https://bugs.gentoo.org/917564 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/vtk: VTK_JAVA_SOURCE_VERSION "1.8"Volkmar W. Pogatzki2023-11-212-0/+18
| | | | | | | Closes: https://bugs.gentoo.org/916951 Closes: https://github.com/gentoo/gentoo/pull/33690 Signed-off-by: Volkmar W. Pogatzki <gentoo@pogatzki.net> Signed-off-by: Guilherme Amadio <amadio@gentoo.org>
* sci-libs/hipFFT: use HIP config.Benda Xu2023-11-202-0/+41
| | | | | | | hipFFT is not updated in 5.7.1, and we need to manually backport it. Reference: https://github.com/ROCmSoftwarePlatform/hipFFT/pull/66 Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/scikit-learn: Keyword 1.3.2-r1 ppc64, #916250Arthur Zamarin2023-11-191-1/+1
| | | | Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
* sci-libs/rocRAND: add dev-cpp/benchmark dependency.Benda Xu2023-11-202-6/+8
| | | | | Closes: https://bugs.gentoo.org/913111 Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/hipRAND: correct the on disk file name. Bump to 5.7.1.Benda Xu2023-11-203-2/+39
| | | | Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/rocRAND: add 5.7.1 and fix_generator_alignements.patchSv. Lockal2023-11-203-0/+84
| | | | | | Bug: https://github.com/gentoo/gentoo/pull/33400 Signed-off-by: Sv. Lockal <lockalsash@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/hipFFT: add 5.7.1Benda Xu2023-11-202-0/+46
| | | | Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/rocFFT: add 5.7.1 and fix test dependencies.Sv. Lockal2023-11-202-0/+151
| | | | | | | | | Cannonicalize the include path as no directory hacks are needed for 5.7.1. Bug: https://github.com/gentoo/gentoo/pull/33400 Signed-off-by: Sv. Lockal <lockalsash@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/gdal: fix java-pkg_doso pathSam James2023-11-181-2/+2
| | | | | Closes: https://bugs.gentoo.org/917563 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: Stabilize 3.7.3 ppc64, #917540Sam James2023-11-181-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: Stabilize 3.7.3 arm64, #917540Sam James2023-11-181-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: add 3.8.0Sam James2023-11-182-0/+288
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/geos: add 3.12.1Sam James2023-11-182-0/+47
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: add 3.7.3Sam James2023-11-182-0/+288
| | | | | | | Closes: https://bugs.gentoo.org/910531 Closes: https://bugs.gentoo.org/914176 Closes: https://bugs.gentoo.org/915880 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/tokenizers: add 0.14.1, drop 0.14.0Alfredo Tupone2023-11-162-74/+85
| | | | Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-libs/vtk: add myself as maintainerPaul Zander2023-11-161-1/+5
| | | | | | Signed-off-by: Paul Zander <negril.nx+gentoo@gmail.com> Closes: https://github.com/gentoo/gentoo/pull/33693 Signed-off-by: Florian Schmaus <flow@gentoo.org>