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authorGeorge Shapovalov <george@gentoo.org>2003-08-08 23:36:23 +0000
committerGeorge Shapovalov <george@gentoo.org>2003-08-08 23:36:23 +0000
commite34a8feab5c9010297540868410f167483ab76f0 (patch)
treec8e703c01c0f08cf6e0c8b7fad68c3fb79f76d41 /app-sci/biopython
parentnew version (diff)
downloadgentoo-2-e34a8feab5c9010297540868410f167483ab76f0.tar.gz
gentoo-2-e34a8feab5c9010297540868410f167483ab76f0.tar.bz2
gentoo-2-e34a8feab5c9010297540868410f167483ab76f0.zip
new version, marked 1.10 stable
Diffstat (limited to 'app-sci/biopython')
-rw-r--r--app-sci/biopython/ChangeLog8
-rw-r--r--app-sci/biopython/Manifest6
-rw-r--r--app-sci/biopython/biopython-1.10.ebuild6
-rw-r--r--app-sci/biopython/biopython-1.21.ebuild33
-rw-r--r--app-sci/biopython/files/digest-biopython-1.211
5 files changed, 48 insertions, 6 deletions
diff --git a/app-sci/biopython/ChangeLog b/app-sci/biopython/ChangeLog
index 434fca716358..ba04e5d6dafa 100644
--- a/app-sci/biopython/ChangeLog
+++ b/app-sci/biopython/ChangeLog
@@ -1,6 +1,12 @@
# ChangeLog for app-sci/biopython
# Copyright 2002 Gentoo Technologies, Inc.; Distributed under the GPL
-# $Header: /var/cvsroot/gentoo-x86/app-sci/biopython/ChangeLog,v 1.2 2003/07/04 12:19:06 liquidx Exp $
+# $Header: /var/cvsroot/gentoo-x86/app-sci/biopython/ChangeLog,v 1.3 2003/08/08 23:36:18 george Exp $
+
+*biopython-1.21 (08 Aug 2003)
+
+ 08 Aug 2003; George Shapovalov <george@gentoo.org> biopython-1.21.ebuild :
+ new version, added few docs (#25428)
+ thanks to Daniel Jaeggi <daniel@jaeggi.co.uk> for notification
04 Jul 2003; Alastair Tse <liquidx@gentoo.org> biopython-1.10.ebuild:
renamed reportlab dep
diff --git a/app-sci/biopython/Manifest b/app-sci/biopython/Manifest
index 5c5f9a782c7c..ea7c8013eff0 100644
--- a/app-sci/biopython/Manifest
+++ b/app-sci/biopython/Manifest
@@ -1,4 +1,6 @@
-MD5 9f8677f140b084471371023376c24a50 ChangeLog 610
-MD5 542d55c11f796a538a37bd7f39c23ede biopython-1.10.ebuild 839
+MD5 c6d8dff13847885f2e6ac3bb273e11fb biopython-1.10.ebuild 834
+MD5 75479ed2fc75a0b155ec8bf08ae43cb8 ChangeLog 822
MD5 e52ec7d225835cda2c95c5317cdccfb4 metadata.xml 217
+MD5 12dcbe88cd9cec0c5c6989d7c0c4147f biopython-1.21.ebuild 927
MD5 8e719491da5d9664fddedbffc6af8f06 files/digest-biopython-1.10 67
+MD5 c54d7ea5347210ae92b5e01a346e2a21 files/digest-biopython-1.21 67
diff --git a/app-sci/biopython/biopython-1.10.ebuild b/app-sci/biopython/biopython-1.10.ebuild
index 73b250942990..8ed737239e1c 100644
--- a/app-sci/biopython/biopython-1.10.ebuild
+++ b/app-sci/biopython/biopython-1.10.ebuild
@@ -1,12 +1,12 @@
# Copyright 1999-20022 Gentoo Technologies, Inc.
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/app-sci/biopython/biopython-1.10.ebuild,v 1.2 2003/07/04 12:19:06 liquidx Exp $
+# $Header: /var/cvsroot/gentoo-x86/app-sci/biopython/biopython-1.10.ebuild,v 1.3 2003/08/08 23:36:18 george Exp $
IUSE=""
S=${WORKDIR}/${P}
DESCRIPTION="Biopython - python module for Computational Moelcular Biology"
-SRC_URI="http://www.biopython.org/Download/${P}.tar.gz"
+SRC_URI="http://www.biopython.org/files/${P}.tar.gz"
HOMEPAGE="http://www.biopython.org"
DEPEND=">=dev-lang/python-2.0
@@ -16,7 +16,7 @@ DEPEND=">=dev-lang/python-2.0
SLOT="0"
LICENSE="as-is"
-KEYWORDS="~x86 ~ppc ~sparc ~alpha"
+KEYWORDS="x86 ~ppc ~sparc ~alpha"
src_compile() {
python setup.py build || die
diff --git a/app-sci/biopython/biopython-1.21.ebuild b/app-sci/biopython/biopython-1.21.ebuild
new file mode 100644
index 000000000000..3fbff71b8723
--- /dev/null
+++ b/app-sci/biopython/biopython-1.21.ebuild
@@ -0,0 +1,33 @@
+# Copyright 1999-20022 Gentoo Technologies, Inc.
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/app-sci/biopython/biopython-1.21.ebuild,v 1.1 2003/08/08 23:36:18 george Exp $
+
+IUSE=""
+
+S=${WORKDIR}/${P}
+DESCRIPTION="Biopython - python module for Computational Moelcular Biology"
+SRC_URI="http://www.biopython.org/files/${P}.tar.gz"
+HOMEPAGE="http://www.biopython.org"
+
+DEPEND=">=dev-lang/python-2.0
+ >=dev-python/egenix-mx-base-2.0.3
+ >=dev-python/Numeric-19.0
+ >=dev-python/reportlab-1.11"
+
+SLOT="0"
+LICENSE="as-is"
+KEYWORDS="~x86 ~ppc ~sparc ~alpha"
+
+src_compile() {
+ python setup.py build || die
+# python setup.py test --no-gui || die
+}
+
+src_install() {
+ echo y | python setup.py install --prefix=${D}/usr || die
+
+ dodoc PKG-INFO README NEWS LICENSE CONTRIB
+ dodoc Doc/* Doc/install/*.txt
+ dohtml Doc/install/*.html
+ cp -r Doc/examples/ ${D}/usr/share/doc/${PF}/
+}
diff --git a/app-sci/biopython/files/digest-biopython-1.21 b/app-sci/biopython/files/digest-biopython-1.21
new file mode 100644
index 000000000000..f70b75933970
--- /dev/null
+++ b/app-sci/biopython/files/digest-biopython-1.21
@@ -0,0 +1 @@
+MD5 8a27104790cb7fbd9cf4e94c84a27e0b biopython-1.21.tar.gz 2214464