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authorAndrey Kislyuk <weaver@gentoo.org>2009-07-21 08:12:46 +0000
committerAndrey Kislyuk <weaver@gentoo.org>2009-07-21 08:12:46 +0000
commit7223a950bd128288f0a2e3222af89d890e515498 (patch)
treead11282766b3bff1be0c619911c511f455b7ff03 /sci-biology/lagan/lagan-2.0.ebuild
parentVersion bump. (diff)
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Fix compilation with glibc-2.10, bug 273988
(Portage version: 2.2_rc30/cvs/Linux x86_64)
Diffstat (limited to 'sci-biology/lagan/lagan-2.0.ebuild')
-rw-r--r--sci-biology/lagan/lagan-2.0.ebuild47
1 files changed, 0 insertions, 47 deletions
diff --git a/sci-biology/lagan/lagan-2.0.ebuild b/sci-biology/lagan/lagan-2.0.ebuild
deleted file mode 100644
index 79049af85ace..000000000000
--- a/sci-biology/lagan/lagan-2.0.ebuild
+++ /dev/null
@@ -1,47 +0,0 @@
-# Copyright 1999-2009 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/lagan/lagan-2.0.ebuild,v 1.1 2009/02/27 00:23:49 weaver Exp $
-
-inherit eutils
-
-MY_PV="20"
-
-DESCRIPTION="LAGAN, Multi-LAGAN, Shuffle-LAGAN, Supermap: Whole-genome multiple alignment of genomic DNA"
-HOMEPAGE="http://lagan.stanford.edu/lagan_web/index.shtml"
-SRC_URI="http://lagan.stanford.edu/lagan_web/lagan${MY_PV}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-IUSE=""
-KEYWORDS="~amd64 ~x86"
-
-DEPEND=""
-RDEPEND=""
-
-S="${WORKDIR}/lagan${MY_PV}"
-
-src_unpack() {
- unpack ${A}
- sed -i "/use Getopt::Long;/ i use lib \"/usr/share/${PN}/lib\";" "${S}/supermap.pl" || die
- epatch "${FILESDIR}"/${P}-*.patch
-}
-
-src_install() {
- dobin lagan.pl slagan.pl mlagan
- rm lagan.pl slagan.pl utils/Utils.pm
- dodir /usr/share/${PN}/lib
- insinto /usr/share/${PN}/lib
- doins Utils.pm
- exeinto /usr/share/${PN}/utils
- doexe utils/*
- exeinto /usr/share/${PN}
- doexe *.pl anchors chaos glocal order prolagan
- insinto /usr/share/${PN}
- doins *.txt
- dosym /usr/share/${PN}/supermap.pl /usr/bin/supermap
- dosym /usr/bin/lagan.pl /usr/bin/lagan
- dosym /usr/bin/slagan.pl /usr/bin/slagan
- echo "LAGAN_DIR=\"/usr/share/${PN}\"" > ${S}/99${PN}
- doenvd "${S}/99${PN}"
- dodoc Readmes/README.*
-}