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author | Andrey Kislyuk <weaver@gentoo.org> | 2009-07-21 08:12:46 +0000 |
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committer | Andrey Kislyuk <weaver@gentoo.org> | 2009-07-21 08:12:46 +0000 |
commit | 7223a950bd128288f0a2e3222af89d890e515498 (patch) | |
tree | ad11282766b3bff1be0c619911c511f455b7ff03 /sci-biology/lagan/lagan-2.0.ebuild | |
parent | Version bump. (diff) | |
download | gentoo-2-7223a950bd128288f0a2e3222af89d890e515498.tar.gz gentoo-2-7223a950bd128288f0a2e3222af89d890e515498.tar.bz2 gentoo-2-7223a950bd128288f0a2e3222af89d890e515498.zip |
Fix compilation with glibc-2.10, bug 273988
(Portage version: 2.2_rc30/cvs/Linux x86_64)
Diffstat (limited to 'sci-biology/lagan/lagan-2.0.ebuild')
-rw-r--r-- | sci-biology/lagan/lagan-2.0.ebuild | 47 |
1 files changed, 0 insertions, 47 deletions
diff --git a/sci-biology/lagan/lagan-2.0.ebuild b/sci-biology/lagan/lagan-2.0.ebuild deleted file mode 100644 index 79049af85ace..000000000000 --- a/sci-biology/lagan/lagan-2.0.ebuild +++ /dev/null @@ -1,47 +0,0 @@ -# Copyright 1999-2009 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/lagan/lagan-2.0.ebuild,v 1.1 2009/02/27 00:23:49 weaver Exp $ - -inherit eutils - -MY_PV="20" - -DESCRIPTION="LAGAN, Multi-LAGAN, Shuffle-LAGAN, Supermap: Whole-genome multiple alignment of genomic DNA" -HOMEPAGE="http://lagan.stanford.edu/lagan_web/index.shtml" -SRC_URI="http://lagan.stanford.edu/lagan_web/lagan${MY_PV}.tar.gz" - -LICENSE="GPL-2" -SLOT="0" -IUSE="" -KEYWORDS="~amd64 ~x86" - -DEPEND="" -RDEPEND="" - -S="${WORKDIR}/lagan${MY_PV}" - -src_unpack() { - unpack ${A} - sed -i "/use Getopt::Long;/ i use lib \"/usr/share/${PN}/lib\";" "${S}/supermap.pl" || die - epatch "${FILESDIR}"/${P}-*.patch -} - -src_install() { - dobin lagan.pl slagan.pl mlagan - rm lagan.pl slagan.pl utils/Utils.pm - dodir /usr/share/${PN}/lib - insinto /usr/share/${PN}/lib - doins Utils.pm - exeinto /usr/share/${PN}/utils - doexe utils/* - exeinto /usr/share/${PN} - doexe *.pl anchors chaos glocal order prolagan - insinto /usr/share/${PN} - doins *.txt - dosym /usr/share/${PN}/supermap.pl /usr/bin/supermap - dosym /usr/bin/lagan.pl /usr/bin/lagan - dosym /usr/bin/slagan.pl /usr/bin/slagan - echo "LAGAN_DIR=\"/usr/share/${PN}\"" > ${S}/99${PN} - doenvd "${S}/99${PN}" - dodoc Readmes/README.* -} |