Fixed file collision with "sys-apps/coreutils" (bug #115482)

(Portage version: 2.0.51.22-r3)

2 files changed, 15 insertions, 0 deletions

diff --git a/sci-biology/phylip/files/README.Gentoo b/sci-biology/phylip/files/README.Gentoo
new file mode 100644
index 000000000000..0598c1541631
--- /dev/null
+++ b/sci-biology/phylip/files/README.Gentoo
@@ -0,0 +1,15 @@
+Using the PHYlogeny Inference Package on Gentoo systems
+
+Location of the factor program
+
+On Gentoo systems, the PHYLIP program "factor" is named "factor-phylip", in
+order to avoid a file collision with the program of the same name provided by
+the "sys-apps/coreutils" package.
+
+Location of the font files
+
+PHYLIP programs will find font files only if they are in a directory
+referenced by the "PATH" variable or if they are in the current working
+directory. When working with PHYLIP programs that need these files, either
+copy the fonts you need in your working directory, or add
+"/usr/share/phylip/fonts/" to your "PATH" variable.
diff --git a/sci-biology/phylip/files/digest-phylip-3.65 b/sci-biology/phylip/files/digest-phylip-3.65-r1
index ab57e5b003a0..ab57e5b003a0 100644
--- a/sci-biology/phylip/files/digest-phylip-3.65
+++ b/sci-biology/phylip/files/digest-phylip-3.65-r1