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authorJustin Lecher <jlec@gentoo.org>2012-10-18 17:46:32 +0000
committerJustin Lecher <jlec@gentoo.org>2012-10-18 17:46:32 +0000
commitd70d3fac535577ea38b6e87606e6dcddbc2bb87b (patch)
tree3ee02f6f89429f574e8201f6f741f0ab5c3185b6 /sci-biology/seaview
parentsci-biology/glimmerhmm: Drop old (diff)
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sci-biology/seaview: Drop old
(Portage version: 2.2.0_alpha141/cvs/Linux x86_64, signed Manifest commit with key 70EB7916)
Diffstat (limited to 'sci-biology/seaview')
-rw-r--r--sci-biology/seaview/ChangeLog5
-rw-r--r--sci-biology/seaview/seaview-4.2.5.ebuild76
2 files changed, 4 insertions, 77 deletions
diff --git a/sci-biology/seaview/ChangeLog b/sci-biology/seaview/ChangeLog
index b7bd8c1bac97..cc761beb0b1b 100644
--- a/sci-biology/seaview/ChangeLog
+++ b/sci-biology/seaview/ChangeLog
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/seaview
# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/ChangeLog,v 1.45 2012/10/17 03:36:26 phajdan.jr Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/ChangeLog,v 1.46 2012/10/18 17:46:32 jlec Exp $
+
+ 18 Oct 2012; Justin Lecher <jlec@gentoo.org> -seaview-4.2.5.ebuild:
+ Drop old
17 Oct 2012; Pawel Hajdan jr <phajdan.jr@gentoo.org> seaview-4.3.3.ebuild:
x86 stable wrt bug #432366
diff --git a/sci-biology/seaview/seaview-4.2.5.ebuild b/sci-biology/seaview/seaview-4.2.5.ebuild
deleted file mode 100644
index 6d5cb9ab2e33..000000000000
--- a/sci-biology/seaview/seaview-4.2.5.ebuild
+++ /dev/null
@@ -1,76 +0,0 @@
-# Copyright 1999-2012 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/seaview-4.2.5.ebuild,v 1.7 2012/09/14 11:46:14 jlec Exp $
-
-EAPI=4
-
-inherit base eutils multilib toolchain-funcs
-
-DESCRIPTION="A graphical multiple sequence alignment editor"
-HOMEPAGE="http://pbil.univ-lyon1.fr/software/seaview.html"
-SRC_URI="ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/${PN}_${PV}.tar.gz"
-
-LICENSE="public-domain"
-SLOT="0"
-KEYWORDS="amd64 x86"
-IUSE="+xft"
-
-DEPEND="
- sys-libs/zlib
- x11-libs/fltk:1
- x11-libs/libX11
- xft? (
- x11-libs/libXft
- x11-libs/fltk:1[xft] )"
-RDEPEND="${DEPEND}
- sci-biology/clustalw
- || ( sci-libs/libmuscle sci-biology/muscle )
- sci-biology/phyml"
-
-S="${WORKDIR}/${PN}"
-
-src_prepare() {
- # respect CXXFLAGS (package uses them as CFLAGS)
- sed \
- -e "s:^CXX.*:CXX = $(tc-getCXX):" \
- -e "s:\$(OPT):${CXXFLAGS}:" \
- -e "s:^OPT:#OPT:" \
- -e "s:^FLTK = /usr/include:FLTK = /usr/include/fltk-1:" \
- -e "s:^#IFLTK .*:IFLTK = $(fltk-config --use-images --cxxflags):" \
- -e "s:^#LFLTK .*:LFLTK = $(fltk-config --use-images --ldflags):" \
- -e "s:^USE_XFT:#USE_XFT:" \
- -e "s:^#HELPFILE:HELPFILE:" \
- -e "s:^#PHYMLNAME:PHYMLNAME:" \
- -e 's:-lXinerama::g' \
- -e 's:-lpng::g' \
- -e 's:-ljpeg::g' \
- -e 's:-lfontconfig::g' \
- -i Makefile || die "sed failed while editing Makefile"
-
- if use xft; then
- sed \
- -e "s:^#USE_XFT .*:USE_XFT = -DUSE_XFT $(pkg-config --cflags xft):" \
- -e "s:-lXft:$(pkg-config --libs xft):" \
- -i Makefile || die "sed failed while editing Makefile to enable xft"
- else
- sed -i -e "s:-lXft::" Makefile || die
- fi
- cd FL || die
- ln -sf . FL
- base_src_prepare
-}
-
-src_install() {
- dobin seaview
-
- # /usr/share/seaview/seaview.html is hardcoded in the binary, see Makefile
- insinto /usr/share/seaview
- doins example.nxs seaview.html
-
- insinto /usr/share/seaview/images
- doins seaview.xpm
-
- make_desktop_entry seaview Seaview
-
- doman seaview.1
-}