summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorAndrey Kislyuk <weaver@gentoo.org>2011-01-27 16:23:34 +0000
committerAndrey Kislyuk <weaver@gentoo.org>2011-01-27 16:23:34 +0000
commit3ce9289104d2832a155b2e9677ab7df03dcaad8f (patch)
tree396871e586c8df6b7c2939eada7fa16a597866cb /sci-biology
parentversion bump; cleanup old revisions (diff)
downloadgentoo-2-3ce9289104d2832a155b2e9677ab7df03dcaad8f.tar.gz
gentoo-2-3ce9289104d2832a155b2e9677ab7df03dcaad8f.tar.bz2
gentoo-2-3ce9289104d2832a155b2e9677ab7df03dcaad8f.zip
Drop ~x86, avoid collision with sci-biology/vaal
(Portage version: 2.2_rc86/cvs/Linux x86_64)
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/allpathslg/ChangeLog8
-rw-r--r--sci-biology/allpathslg/allpathslg-35725-r1.ebuild (renamed from sci-biology/allpathslg/allpathslg-35725.ebuild)11
2 files changed, 15 insertions, 4 deletions
diff --git a/sci-biology/allpathslg/ChangeLog b/sci-biology/allpathslg/ChangeLog
index fa2d95732699..efa135b0eab4 100644
--- a/sci-biology/allpathslg/ChangeLog
+++ b/sci-biology/allpathslg/ChangeLog
@@ -1,6 +1,12 @@
# ChangeLog for sci-biology/allpathslg
# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v 1.1 2011/01/25 16:51:48 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v 1.2 2011/01/27 16:23:34 weaver Exp $
+
+*allpathslg-35725-r1 (27 Jan 2011)
+
+ 27 Jan 2011; Andrey Kislyuk <weaver@gentoo.org> -allpathslg-35725.ebuild,
+ +allpathslg-35725-r1.ebuild:
+ Drop ~x86, avoid collision with sci-biology/vaal
*allpathslg-35725 (25 Jan 2011)
diff --git a/sci-biology/allpathslg/allpathslg-35725.ebuild b/sci-biology/allpathslg/allpathslg-35725-r1.ebuild
index bb15b1247914..e0d302533393 100644
--- a/sci-biology/allpathslg/allpathslg-35725.ebuild
+++ b/sci-biology/allpathslg/allpathslg-35725-r1.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/allpathslg-35725.ebuild,v 1.1 2011/01/25 16:51:48 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/allpathslg-35725-r1.ebuild,v 1.1 2011/01/27 16:23:34 weaver Exp $
EAPI="2"
@@ -13,10 +13,11 @@ SRC_URI="ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_
LICENSE="as-is"
SLOT="0"
IUSE=""
-KEYWORDS="~amd64 ~x86"
+KEYWORDS="~amd64"
DEPEND="dev-libs/boost
- >=sys-devel/gcc-4.3.3"
+ >=sys-devel/gcc-4.3.3
+ sci-biology/vaal"
RDEPEND=""
src_prepare() {
@@ -25,4 +26,8 @@ src_prepare() {
src_install() {
einstall || die
+ # Provided by sci-biology/vaal
+ for i in QueryLookupTable ScaffoldAccuracy MakeLookupTable Fastb ShortQueryLookup; do
+ rm "${D}/usr/bin/$i" || die
+ done
}