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| author |   Andrey Kislyuk <weaver@gentoo.org> | 2008-12-27 05:23:56 +0000 |
|---|---|---|
| committer | Andrey Kislyuk <weaver@gentoo.org> | 2008-12-27 05:23:56 +0000 |
| commit | 401331e175fefeea56bbd033fd3649eca754a1bc (patch) | |
| tree | ddc8f4267f4155d91b9d926a4f6476d63a2713c4 /sci-biology | |
| parent | Unmask media-video/dvdrip on no-multilib profiles based on Michael Lange's te... (diff) | |
| download | gentoo-2-401331e175fefeea56bbd033fd3649eca754a1bc.tar.gz gentoo-2-401331e175fefeea56bbd033fd3649eca754a1bc.tar.bz2 gentoo-2-401331e175fefeea56bbd033fd3649eca754a1bc.zip | |
Import from Science overlay, bug 175143
(Portage version: 2.2_rc12/cvs/Linux 2.6.26-tuxonice i686)
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/sibsim4/ChangeLog | 10 | ||||
| -rw-r--r-- | sci-biology/sibsim4/Manifest | 4 | ||||
| -rw-r--r-- | sci-biology/sibsim4/metadata.xml | 9 | ||||
| -rw-r--r-- | sci-biology/sibsim4/sibsim4-0.17.ebuild | 27 |
4 files changed, 50 insertions, 0 deletions
diff --git a/sci-biology/sibsim4/ChangeLog b/sci-biology/sibsim4/ChangeLog new file mode 100644 index 000000000000..463fb67b5e62 --- /dev/null +++ b/sci-biology/sibsim4/ChangeLog @@ -0,0 +1,10 @@ +# ChangeLog for sci-biology/sibsim4 +# Copyright 1999-2008 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/sibsim4/ChangeLog,v 1.1 2008/12/27 05:23:56 weaver Exp $ + +*sibsim4-0.17 (27 Dec 2008) + + 27 Dec 2008; weaver <weaver@gentoo.org> +metadata.xml, + +sibsim4-0.17.ebuild: + Import from Science overlay, bug 175143 + diff --git a/sci-biology/sibsim4/Manifest b/sci-biology/sibsim4/Manifest new file mode 100644 index 000000000000..47a6d5d505c2 --- /dev/null +++ b/sci-biology/sibsim4/Manifest @@ -0,0 +1,4 @@ +DIST SIBsim4-0.17.tar.gz 30822 RMD160 9ad3ede299212145f9c095a55c446558947a2396 SHA1 adec7e0872b6a5c93b493e320ee87be2e90dbb38 SHA256 f01d53cb07d946d1f488d97e157bfff858233a2f5ce960ba26a039ee246a3c6f +EBUILD sibsim4-0.17.ebuild 551 RMD160 d63c2df2270a0ab6373911fc41e83ed9225e7c26 SHA1 22eb4bbb68e51b188d50f5866c47c690c53dd604 SHA256 1c1694620732dae1a7ef16c4eabbfabe804fae64b66de82966f9764122fa9115 +MISC ChangeLog 273 RMD160 0bb953f6ecc18ea3f27d68fc166a63b19691f575 SHA1 8da39371f462fa3ba2237df00e3d9748f1af55aa SHA256 4c159090673c19198cd471f7805cc7c816981281a1e45e00930519ef08b779af +MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110 diff --git a/sci-biology/sibsim4/metadata.xml b/sci-biology/sibsim4/metadata.xml new file mode 100644 index 000000000000..3302123e5718 --- /dev/null +++ b/sci-biology/sibsim4/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <maintainer> + <email>weaver@gentoo.org</email> + <name>Andrey Kislyuk</name> + </maintainer> + <herd>sci-biology</herd> +</pkgmetadata> diff --git a/sci-biology/sibsim4/sibsim4-0.17.ebuild b/sci-biology/sibsim4/sibsim4-0.17.ebuild new file mode 100644 index 000000000000..f1b17061779c --- /dev/null +++ b/sci-biology/sibsim4/sibsim4-0.17.ebuild @@ -0,0 +1,27 @@ +# Copyright 1999-2008 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/sibsim4/sibsim4-0.17.ebuild,v 1.1 2008/12/27 05:23:56 weaver Exp $ + +DESCRIPTION="A rewrite and improvement upon sim4, a DNA-mRNA aligner" +HOMEPAGE="http://sibsim4.sourceforge.net/" +SRC_URI="mirror://sourceforge/${PN}/SIBsim4-${PV}.tar.gz" + +LICENSE="GPL-2" +SLOT="0" +IUSE="" +KEYWORDS="~amd64 ~x86" + +DEPEND="" +RDEPEND="" + +S="${WORKDIR}/SIBsim4-${PV}" + +src_unpack() { + unpack ${A} + sed -i 's/CFLAGS = \(.*\)/CFLAGS := \1 ${CFLAGS}/' "${S}/Makefile" +} + +src_install() { + dobin SIBsim4 + doman SIBsim4.1 +} |