summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorAndrey Kislyuk <weaver@gentoo.org>2011-05-18 16:11:49 +0000
committerAndrey Kislyuk <weaver@gentoo.org>2011-05-18 16:11:49 +0000
commit7a21ddc6e92d9d31bcef64b42d6bf98b63aede9d (patch)
tree39975ccbd2b9c8a4c400b5b6cb5d15ad2fe48ef8 /sci-biology
parentStable for HPPA (bug #363633). (diff)
downloadgentoo-2-7a21ddc6e92d9d31bcef64b42d6bf98b63aede9d.tar.gz
gentoo-2-7a21ddc6e92d9d31bcef64b42d6bf98b63aede9d.tar.bz2
gentoo-2-7a21ddc6e92d9d31bcef64b42d6bf98b63aede9d.zip
Version bump
(Portage version: 2.2_rc86/cvs/Linux x86_64)
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/bfast/ChangeLog16
-rw-r--r--sci-biology/bfast/bfast-0.6.4d.ebuild (renamed from sci-biology/bfast/bfast-0.6.4b.ebuild)4
-rw-r--r--sci-biology/bfast/bfast-0.6.5a.ebuild35
3 files changed, 51 insertions, 4 deletions
diff --git a/sci-biology/bfast/ChangeLog b/sci-biology/bfast/ChangeLog
index 992cbbd3d743..c722f8bae228 100644
--- a/sci-biology/bfast/ChangeLog
+++ b/sci-biology/bfast/ChangeLog
@@ -1,6 +1,18 @@
# ChangeLog for sci-biology/bfast
-# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bfast/ChangeLog,v 1.3 2010/05/07 19:21:57 weaver Exp $
+# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bfast/ChangeLog,v 1.4 2011/05/18 16:11:49 weaver Exp $
+
+*bfast-0.6.5a (18 May 2011)
+
+ 18 May 2011; Andrey Kislyuk <weaver@gentoo.org> -bfast-0.6.4b.ebuild,
+ +bfast-0.6.4d.ebuild, +bfast-0.6.5a.ebuild:
+ Version bump
+
+*bfast-0.6.4d (11 Jul 2010)
+
+ 11 Jul 2010; Andrey Kislyuk <weaver@gentoo.org> -bfast-0.6.4b.ebuild,
+ +bfast-0.6.4d.ebuild:
+ Version bump
*bfast-0.6.4c (07 May 2010)
diff --git a/sci-biology/bfast/bfast-0.6.4b.ebuild b/sci-biology/bfast/bfast-0.6.4d.ebuild
index ee98c04b74b9..5bfbf5854c67 100644
--- a/sci-biology/bfast/bfast-0.6.4b.ebuild
+++ b/sci-biology/bfast/bfast-0.6.4d.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2010 Gentoo Foundation
+# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bfast/bfast-0.6.4b.ebuild,v 1.1 2010/04/18 23:41:06 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bfast/bfast-0.6.4d.ebuild,v 1.1 2011/05/18 16:11:49 weaver Exp $
EAPI="2"
diff --git a/sci-biology/bfast/bfast-0.6.5a.ebuild b/sci-biology/bfast/bfast-0.6.5a.ebuild
new file mode 100644
index 000000000000..c086febcb233
--- /dev/null
+++ b/sci-biology/bfast/bfast-0.6.5a.ebuild
@@ -0,0 +1,35 @@
+# Copyright 1999-2011 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bfast/bfast-0.6.5a.ebuild,v 1.1 2011/05/18 16:11:49 weaver Exp $
+
+EAPI="2"
+
+inherit autotools
+
+DESCRIPTION="Blat-like Fast Accurate Search Tool"
+HOMEPAGE="https://sourceforge.net/projects/bfast/"
+SRC_URI="mirror://sourceforge/${PN}/${P}.tar.gz"
+
+LICENSE="GPL-2"
+SLOT="0"
+IUSE=""
+KEYWORDS="~amd64 ~x86"
+
+DEPEND=""
+RDEPEND="dev-perl/XML-Simple"
+
+src_prepare() {
+ sed -i -e 's/-m64//' \
+ -e 's/CFLAGS="${default_CFLAGS} ${extended_CFLAGS}"/CFLAGS="${CFLAGS} ${default_CFLAGS} ${extended_CFLAGS}"/' \
+ configure.ac || die
+ eautoreconf
+}
+
+src_install() {
+ einstall || die
+ dodoc AUTHORS NEWS README
+}
+
+src_test() {
+ emake check || die
+}