diff options
author | Sebastien Fabbro <bicatali@gentoo.org> | 2007-08-05 12:07:03 +0000 |
---|---|---|
committer | Sebastien Fabbro <bicatali@gentoo.org> | 2007-08-05 12:07:03 +0000 |
commit | 94d688b1e336a1e3c7512e6b4071803c0015fe50 (patch) | |
tree | ffde9a0b810029fb016fa0aa3eb64247dfe53883 /sci-libs | |
parent | Remove the dependency on sys-libs/lrmi. (diff) | |
download | gentoo-2-94d688b1e336a1e3c7512e6b4071803c0015fe50.tar.gz gentoo-2-94d688b1e336a1e3c7512e6b4071803c0015fe50.tar.bz2 gentoo-2-94d688b1e336a1e3c7512e6b4071803c0015fe50.zip |
Fixed parallel-make for fortran. Closing bug #187759, thanks to Ed Catmur <ed@catmur.co.uk>. Removed obsolete versions.
(Portage version: 2.1.2.11)
Diffstat (limited to 'sci-libs')
-rw-r--r-- | sci-libs/netcdf/ChangeLog | 8 | ||||
-rw-r--r-- | sci-libs/netcdf/files/digest-netcdf-3.5.0-r3 | 3 | ||||
-rw-r--r-- | sci-libs/netcdf/files/digest-netcdf-3.6.0-r1 | 3 | ||||
-rw-r--r-- | sci-libs/netcdf/files/gcc3-gentoo.patch | 245 | ||||
-rw-r--r-- | sci-libs/netcdf/files/netcdf-3.6.2-parallel-make.patch | 15 | ||||
-rw-r--r-- | sci-libs/netcdf/netcdf-3.5.0-r3.ebuild | 43 | ||||
-rw-r--r-- | sci-libs/netcdf/netcdf-3.6.0-r1.ebuild | 39 | ||||
-rw-r--r-- | sci-libs/netcdf/netcdf-3.6.2.ebuild | 11 |
8 files changed, 31 insertions, 336 deletions
diff --git a/sci-libs/netcdf/ChangeLog b/sci-libs/netcdf/ChangeLog index f7a4e0097c93..33fe892be2ae 100644 --- a/sci-libs/netcdf/ChangeLog +++ b/sci-libs/netcdf/ChangeLog @@ -1,6 +1,12 @@ # ChangeLog for sci-libs/netcdf # Copyright 2002-2007 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-libs/netcdf/ChangeLog,v 1.36 2007/07/31 03:56:48 nerdboy Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-libs/netcdf/ChangeLog,v 1.37 2007/08/05 12:07:03 bicatali Exp $ + + 05 Aug 2007; Sébastien Fabbro <bicatali@gentoo.org> + +files/netcdf-3.6.2-parallel-make.patch, -files/gcc3-gentoo.patch, + -netcdf-3.5.0-r3.ebuild, -netcdf-3.6.0-r1.ebuild, netcdf-3.6.2.ebuild: + Fixed parallel-make for fortran. Closing bug #187759, thanks to Ed Catmur + <ed@catmur.co.uk>. Removed obsolete versions. 31 Jul 2007; Steve Arnold <nerdboy@gentoo.org> netcdf-3.6.2.ebuild: Added FFLAGS fix for build failure on amd64 (real size mis-match). AFAIK diff --git a/sci-libs/netcdf/files/digest-netcdf-3.5.0-r3 b/sci-libs/netcdf/files/digest-netcdf-3.5.0-r3 deleted file mode 100644 index 730db80e2338..000000000000 --- a/sci-libs/netcdf/files/digest-netcdf-3.5.0-r3 +++ /dev/null @@ -1,3 +0,0 @@ -MD5 28640a40a44f982f90f5eeb15e917a1f netcdf-3.5.0.tar.Z 1319419 -RMD160 4313e00fc56273e871c003bfb27c533d4a7f556f netcdf-3.5.0.tar.Z 1319419 -SHA256 d3a2113a9174d845dc377122826cd68b1e02fbb253c0f0c253b8e1c199c84b97 netcdf-3.5.0.tar.Z 1319419 diff --git a/sci-libs/netcdf/files/digest-netcdf-3.6.0-r1 b/sci-libs/netcdf/files/digest-netcdf-3.6.0-r1 deleted file mode 100644 index 8751c862900c..000000000000 --- a/sci-libs/netcdf/files/digest-netcdf-3.6.0-r1 +++ /dev/null @@ -1,3 +0,0 @@ -MD5 27c193e0462d9979406d167a01a5ee95 netcdf-3.6.0-p1.tar.gz 842025 -RMD160 f59877c5f1f70b7099f263f0a34c1b1bd12d41d9 netcdf-3.6.0-p1.tar.gz 842025 -SHA256 a9e6105ed89ce6cfd2edc78e8184232a2f950e674c5241c28cae361a1fe1adfe netcdf-3.6.0-p1.tar.gz 842025 diff --git a/sci-libs/netcdf/files/gcc3-gentoo.patch b/sci-libs/netcdf/files/gcc3-gentoo.patch deleted file mode 100644 index dd4d05c42f4b..000000000000 --- a/sci-libs/netcdf/files/gcc3-gentoo.patch +++ /dev/null @@ -1,245 +0,0 @@ -*** cxx/ncvalues.h.orig 2002-07-31 03:03:17.000000000 +0930 ---- cxx/ncvalues.h 2002-07-31 03:26:14.000000000 +0930 -*************** -*** 10,25 **** - #ifndef Ncvalues_def - #define Ncvalues_def - -! #include <iostream.h> -! #ifdef STRSTREAM_H_SPEC -! # include STRSTREAM_H_SPEC -! #else -! # include <strstream.h> -! #endif - #include <limits.h> - #include <string.h> - #include "netcdf.h" -! - typedef unsigned char ncbyte; - - #define NC_UNSPECIFIED ((nc_type)0) ---- 10,22 ---- - #ifndef Ncvalues_def - #define Ncvalues_def - -! #include <iostream> -! #include <sstream> -! extern "C" { - #include <limits.h> - #include <string.h> - #include "netcdf.h" -! } - typedef unsigned char ncbyte; - - #define NC_UNSPECIFIED ((nc_type)0) -*************** -*** 82,88 **** - virtual int invalid( void ) const; \ - private: \ - TYPE* the_values; \ -! ostream& print(ostream&) const; \ - }; - - #define NcTypeEnum(TYPE) makename2(_nc__,TYPE) ---- 79,85 ---- - virtual int invalid( void ) const; \ - private: \ - TYPE* the_values; \ -! std::ostream& print(std::ostream&) const; \ - }; - - #define NcTypeEnum(TYPE) makename2(_nc__,TYPE) -*************** -*** 218,228 **** - - #define as_string_implement(TYPE) \ - char* NcVal(TYPE)::as_string( long n ) const \ -! { \ - char* s = new char[32]; \ -! ostrstream ostr(s, sizeof(s)); \ -! ostr << the_values[n] << ends; \ -! return s; \ - } - - class NcValues // ABC for value blocks ---- 215,227 ---- - - #define as_string_implement(TYPE) \ - char* NcVal(TYPE)::as_string( long n ) const \ -! { \ - char* s = new char[32]; \ -! ostringstream ostr; \ -! ostr << the_values[n]; \ -! strncpy(s,ostr.str().c_str(),32); \ -! s[31]=0; \ -! return s; \ - } - - class NcValues // ABC for value blocks -*************** -*** 232,238 **** - NcValues(NcType, long); - virtual ~NcValues( void ); - virtual long num( void ); -! virtual ostream& print(ostream&) const = 0; - virtual void* base( void ) const = 0; - virtual int bytes_for_one( void ) const = 0; - ---- 231,237 ---- - NcValues(NcType, long); - virtual ~NcValues( void ); - virtual long num( void ); -! virtual std::ostream& print(std::ostream&) const = 0; - virtual void* base( void ) const = 0; - virtual int bytes_for_one( void ) const = 0; - -*************** -*** 252,258 **** - protected: - NcType the_type; - long the_number; -! friend ostream& operator<< (ostream&, const NcValues&); - }; - - declare(NcValues,ncbyte) ---- 251,257 ---- - protected: - NcType the_type; - long the_number; -! friend std::ostream& operator<< (std::ostream&, const NcValues&); - }; - - declare(NcValues,ncbyte) -*** cxx/ncvalues.cpp.orig 2002-07-31 03:12:52.000000000 +0930 ---- cxx/ncvalues.cpp 2002-07-31 03:13:56.000000000 +0930 -*************** -*** 7,15 **** - * $Header: /var/cvsroot/gentoo-x86/sci-libs/netcdf/files/gcc3-gentoo.patch,v 1.1 2004/12/28 18:29:26 ribosome Exp $ - *********************************************************************/ - -! #include <iostream.h> // for debugging - #include "ncvalues.h" - - NcValues::NcValues( void ) : the_number(0), the_type(ncNoType) - {} - ---- 7,17 ---- - * $Header: /var/cvsroot/gentoo-x86/sci-libs/netcdf/files/gcc3-gentoo.patch,v 1.1 2004/12/28 18:29:26 ribosome Exp $ - *********************************************************************/ - -! #include <iostream> // for debugging - #include "ncvalues.h" - -+ using namespace std; -+ - NcValues::NcValues( void ) : the_number(0), the_type(ncNoType) - {} - -*************** -*** 304,310 **** - - ostream& NcValues_float::print(ostream& os) const - { -! long save=os.flags(); - os.precision(7); - for(int i = 0; i < the_number - 1; i++) - os << the_values[i] << ", "; ---- 306,312 ---- - - ostream& NcValues_float::print(ostream& os) const - { -! ios::fmtflags save=os.flags(); - os.precision(7); - for(int i = 0; i < the_number - 1; i++) - os << the_values[i] << ", "; -*************** -*** 316,322 **** - - ostream& NcValues_double::print(ostream& os) const - { -! long save=os.flags(); - os.precision(15); - for(int i = 0; i < the_number - 1; i++) - os << the_values[i] << ", "; ---- 318,324 ---- - - ostream& NcValues_double::print(ostream& os) const - { -! ios::fmtflags save=os.flags(); - os.precision(15); - for(int i = 0; i < the_number - 1; i++) - os << the_values[i] << ", "; -*** cxx/netcdfcpp.h.orig 2002-07-31 03:07:35.000000000 +0930 ---- cxx/netcdfcpp.h 2002-07-31 03:07:56.000000000 +0930 -*************** -*** 154,160 **** - virtual ~NcDim( void ); - - // to construct dimensions, since constructor is private -! friend NcFile; - }; - - ---- 154,160 ---- - virtual ~NcDim( void ); - - // to construct dimensions, since constructor is private -! friend class NcFile; - }; - - -*************** -*** 357,363 **** - void init_cur( void ); - - // to make variables, since constructor is private -! friend NcFile; - }; - - ---- 357,363 ---- - void init_cur( void ); - - // to make variables, since constructor is private -! friend class NcFile; - }; - - -*************** -*** 388,394 **** - NcAtt( NcFile*, NcToken); // global attribute - - // To make attributes, since constructor is private -! friend NcFile; - friend NcAtt* NcVar::get_att( NcToken ) const; - }; - ---- 388,394 ---- - NcAtt( NcFile*, NcToken); // global attribute - - // To make attributes, since constructor is private -! friend class NcFile; - friend NcAtt* NcVar::get_att( NcToken ) const; - }; - -*** cxx/nctst.cpp.orig 2002-07-31 04:00:10.000000000 +0930 ---- cxx/nctst.cpp 2002-07-31 04:00:19.000000000 +0930 -*************** -*** 1,7 **** -! #include <iostream.h> - #include <string.h> - #include "netcdfcpp.h" - - void gen(const char* path) // Generate a netCDF file - { - NcFile nc(path, NcFile::Replace); // Create, leave in define mode ---- 1,9 ---- -! #include <iostream> - #include <string.h> - #include "netcdfcpp.h" - -+ using namespace std; -+ - void gen(const char* path) // Generate a netCDF file - { - NcFile nc(path, NcFile::Replace); // Create, leave in define mode diff --git a/sci-libs/netcdf/files/netcdf-3.6.2-parallel-make.patch b/sci-libs/netcdf/files/netcdf-3.6.2-parallel-make.patch new file mode 100644 index 000000000000..11b1b61214e3 --- /dev/null +++ b/sci-libs/netcdf/files/netcdf-3.6.2-parallel-make.patch @@ -0,0 +1,15 @@ +--- f90/Makefile.am 2007/08/04 22:02:56 1.1 ++++ f90/Makefile.am 2007/08/04 22:09:55 +@@ -64,10 +64,12 @@ if UPPER_CASE_MOD + nodist_include_HEADERS = TYPESIZES.mod NETCDF.mod + TYPESIZES.mod: typeSizes.o + NETCDF.mod: $(NETCDF_O) ++$(NETCDF_O): TYPESIZES.mod + else + nodist_include_HEADERS = typesizes.mod netcdf.mod + typesizes.mod: typeSizes.o + netcdf.mod: $(NETCDF_O) ++$(NETCDF_O): typesizes.mod + endif + + # This is what we are building: a convenience library of F90 functions. diff --git a/sci-libs/netcdf/netcdf-3.5.0-r3.ebuild b/sci-libs/netcdf/netcdf-3.5.0-r3.ebuild deleted file mode 100644 index 897d51cf90b9..000000000000 --- a/sci-libs/netcdf/netcdf-3.5.0-r3.ebuild +++ /dev/null @@ -1,43 +0,0 @@ -# Copyright 1999-2005 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-libs/netcdf/netcdf-3.5.0-r3.ebuild,v 1.3 2005/02/18 05:16:41 nerdboy Exp $ - -inherit eutils - -DESCRIPTION="Scientific library and interface for array oriented data access" -SRC_URI="ftp://ftp.unidata.ucar.edu/pub/netcdf/old/${P}.tar.Z" -HOMEPAGE="http://www.unidata.ucar.edu/packages/netcdf/" - -LICENSE="UCAR-Unidata" -SLOT="0" -IUSE="" -KEYWORDS="x86 sparc amd64 alpha ia64 ppc mips hppa" - -S=${WORKDIR}/${P}/src - -src_unpack() { - unpack ${A} - cd ${S} - # welcome to ANSI C++ coding with sed - sed \ - -e 's/iostream\.h/iostream/g' \ - -e 's/cout/std::cout/g' \ - -e 's/^extern "C".*//g' -i configure || die - - cd cxx && epatch ${FILESDIR}/gcc3-gentoo.patch -} - -src_compile() { - export CPPFLAGS=-Df2cFortran - econf || die "econf failed" - make || die - make test || die -} - -src_install() { - dodir /usr/{lib,share} /usr/share/man/man3 /usr/share/man/man3f - einstall MANDIR=${D}/usr/share/man - mv ${D}/usr/share/man/man3/netcdf.3f ${D}/usr/share/man/man3f/. - dodoc COMPATIBILITY COPYRIGHT MANIFEST README RELEASE_NOTES VERSION fortran/cfortran.doc - dohtml -r . -} diff --git a/sci-libs/netcdf/netcdf-3.6.0-r1.ebuild b/sci-libs/netcdf/netcdf-3.6.0-r1.ebuild deleted file mode 100644 index a484da01c0fb..000000000000 --- a/sci-libs/netcdf/netcdf-3.6.0-r1.ebuild +++ /dev/null @@ -1,39 +0,0 @@ -# Copyright 1999-2006 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-libs/netcdf/netcdf-3.6.0-r1.ebuild,v 1.9 2006/05/07 19:53:20 corsair Exp $ - -inherit eutils - -MY_PV=${PV}-p1 - -DESCRIPTION="Scientific library and interface for array oriented data access" -SRC_URI="ftp://ftp.unidata.ucar.edu/pub/netcdf/${PN}-${MY_PV}.tar.gz" -HOMEPAGE="http://my.unidata.ucar.edu/content/software/netcdf/index.html" - -LICENSE="UCAR-Unidata" -SLOT="0" -IUSE="" -KEYWORDS="alpha amd64 hppa ia64 ~mips ppc ppc64 sparc x86" - -S=${WORKDIR}/${PN}-${MY_PV}/src - -src_unpack() { - unpack ${A} - cd ${S} - epatch ${FILESDIR}/fPIC.patch || die "fPIC patch failed" -} - -src_compile() { - export CPPFLAGS=-Df2cFortran - econf || die "econf failed" - make || die "make failed" - make test || die "make test failed" -} - -src_install() { - dodir /usr/{lib,share} /usr/share/man/man3 /usr/share/man/man3f - einstall MANDIR=${D}/usr/share/man - mv ${D}/usr/share/man/man3/netcdf.3f ${D}/usr/share/man/man3f/. - dodoc COMPATIBILITY COPYRIGHT MANIFEST README RELEASE_NOTES VERSION fortran/cfortran.doc - dohtml -r . -} diff --git a/sci-libs/netcdf/netcdf-3.6.2.ebuild b/sci-libs/netcdf/netcdf-3.6.2.ebuild index 096fa9fa55b3..124b6f1e43aa 100644 --- a/sci-libs/netcdf/netcdf-3.6.2.ebuild +++ b/sci-libs/netcdf/netcdf-3.6.2.ebuild @@ -1,8 +1,8 @@ # Copyright 1999-2007 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-libs/netcdf/netcdf-3.6.2.ebuild,v 1.3 2007/07/31 03:56:48 nerdboy Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-libs/netcdf/netcdf-3.6.2.ebuild,v 1.4 2007/08/05 12:07:03 bicatali Exp $ -inherit fortran eutils toolchain-funcs flag-o-matic +inherit fortran eutils toolchain-funcs flag-o-matic autotools DESCRIPTION="Scientific library and interface for array oriented data access" SRC_URI="ftp://ftp.unidata.ucar.edu/pub/netcdf/${P}.tar.gz" @@ -24,6 +24,13 @@ pkg_setup() { fi } +src_unpack() { + unpack ${A} + cd "${S}" + epatch "${FILESDIR}"/${P}-parallel-make.patch + eautoreconf +} + src_compile() { use debug || append-cppflags -DNDEBUG local myconf |