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authorThomas Kahle <tomka@gentoo.org>2011-02-12 11:50:38 +0000
committerThomas Kahle <tomka@gentoo.org>2011-02-12 11:50:38 +0000
commitf9c2e17fe43f1ab73004c16ed4ae322be601aa18 (patch)
tree25ed8a26867b1ec5d6e311ef8026db5ad8c53b69 /sci-mathematics
parentStable on amd64 wrt bug #354513 (diff)
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Imported from science overlay, fixes bug 317741.
(Portage version: 2.1.9.39/cvs/Linux i686)
Diffstat (limited to 'sci-mathematics')
-rw-r--r--sci-mathematics/jags/ChangeLog15
-rw-r--r--sci-mathematics/jags/jags-2.2.0.ebuild35
-rw-r--r--sci-mathematics/jags/metadata.xml15
3 files changed, 65 insertions, 0 deletions
diff --git a/sci-mathematics/jags/ChangeLog b/sci-mathematics/jags/ChangeLog
new file mode 100644
index 000000000000..2a40dc5a21dc
--- /dev/null
+++ b/sci-mathematics/jags/ChangeLog
@@ -0,0 +1,15 @@
+# ChangeLog for sci-mathematics/jags
+# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-mathematics/jags/ChangeLog,v 1.1 2011/02/12 11:50:38 tomka Exp $
+
+ 12 Feb 2011; Thomas Kahle <tomka@gentoo.org> +jags-2.2.0.ebuild,
+ +metadata.xml:
+ Imported from science overlay, fixes bug 317741.
+
+*jags-2.2.0 (04 Dec 2010)
+
+ 04 Dec 2010; Sébastien Fabbro <bicatali@gentoo.org> +jags-2.2.0.ebuild,
+ +metadata.xml:
+ Initial import. Modififed ebuild from originally submitted by Xavier
+ Fernández i Marín, bug #317741
+
diff --git a/sci-mathematics/jags/jags-2.2.0.ebuild b/sci-mathematics/jags/jags-2.2.0.ebuild
new file mode 100644
index 000000000000..f6d60b41af47
--- /dev/null
+++ b/sci-mathematics/jags/jags-2.2.0.ebuild
@@ -0,0 +1,35 @@
+# Copyright 1999-2011 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-mathematics/jags/jags-2.2.0.ebuild,v 1.1 2011/02/12 11:50:38 tomka Exp $
+
+EAPI=2
+inherit autotools-utils
+
+MYP="JAGS-${PV}"
+
+DESCRIPTION="Just Another Gibbs Sampler for Bayesian MCMC simulation"
+HOMEPAGE="http://www-fis.iarc.fr/~martyn/software/jags/"
+SRC_URI="mirror://sourceforge/project/mcmc-jags/JAGS/2.x/Source/${MYP}.tar.gz"
+LICENSE="GPL-2"
+IUSE=""
+
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+
+RDEPEND="virtual/blas
+ virtual/lapack"
+
+DEPEND="${RDEPEND}
+ dev-util/pkgconfig"
+
+S="${WORKDIR}/${MYP}"
+
+DOCS=(README NEWS TODO AUTHORS)
+
+src_configure() {
+ myeconfags=(
+ --with-blas="$(pkg-config --libs blas)"
+ --with-lapack="$(pkg-config --libs lapack)"
+ )
+ autotools-utils_src_configure
+}
diff --git a/sci-mathematics/jags/metadata.xml b/sci-mathematics/jags/metadata.xml
new file mode 100644
index 000000000000..cfbc499c6d25
--- /dev/null
+++ b/sci-mathematics/jags/metadata.xml
@@ -0,0 +1,15 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+<herd>sci-mathematics</herd>
+<longdescription lang="en">
+ JAGS is Just Another Gibbs Sampler. It is a program for analysis of
+ Bayesian hierarchical models using Markov Chain Monte Carlo (MCMC)
+ simulation not wholly unlike BUGS.
+ JAGS was written with three aims in mind:
+ * To have an engine for the BUGS language that runs on Unix
+ * To be extensible, allowing users to write their own functions,
+ distributions and samplers.
+ * To be a plaftorm for experimentation with ideas in Bayesian modelling
+</longdescription>
+</pkgmetadata>