diff options
| -rw-r--r-- | app-sci/hmmer/ChangeLog | 7 | ||||
| -rw-r--r-- | app-sci/hmmer/Manifest | 4 | ||||
| -rw-r--r-- | app-sci/hmmer/files/digest-hmmer-2.3.1 | 1 | ||||
| -rw-r--r-- | app-sci/hmmer/hmmer-2.3.1.ebuild | 39 |
4 files changed, 48 insertions, 3 deletions
diff --git a/app-sci/hmmer/ChangeLog b/app-sci/hmmer/ChangeLog index 09de799cc615..ab842a0812ee 100644 --- a/app-sci/hmmer/ChangeLog +++ b/app-sci/hmmer/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for app-sci/hmmer # Copyright 2000-2003 Gentoo Technologies, Inc.; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/app-sci/hmmer/ChangeLog,v 1.1 2003/05/07 18:47:31 avenj Exp $ +# $Header: /var/cvsroot/gentoo-x86/app-sci/hmmer/ChangeLog,v 1.2 2003/08/28 15:04:09 sediener Exp $ + +*hmmer-2.3.1 (28 Aug 2003) + + 28 Aug 2003; <sediener@gentoo.org> hmmer-2.3.1.ebuild: + Version bump *hmmer-2.2g (07 May 2003) diff --git a/app-sci/hmmer/Manifest b/app-sci/hmmer/Manifest index e716a292e0a8..3ea4d38ac0d0 100644 --- a/app-sci/hmmer/Manifest +++ b/app-sci/hmmer/Manifest @@ -1,7 +1,7 @@ -MD5 64fc143d95ec5af08190e5b52fe79c56 ChangeLog 488 +MD5 a564382d4d62a51f09139dae7f2f7ca6 ChangeLog 491 MD5 fe169490d6ad92c2f52e0773a2b13e64 hmmer-2.2g.ebuild 922 MD5 e8b4df3df76800c376905734d8043cfa metadata.xml 216 -MD5 e864c8b000de83890cbc4cbccb25b11a hmmer-2.3.1.ebuild 828 +MD5 4c94be1eaa6d1fe1c01d691c5876f669 hmmer-2.3.1.ebuild 925 MD5 9fbc129db1a886510ff026fd89e131f1 files/Makefile-hmmer-2.2g.patch 1040 MD5 bd33e448c26a59469256420a3b920600 files/digest-hmmer-2.2g 62 MD5 841308887ec35169e15824b34ffb4c64 files/digest-hmmer-2.3.1 64 diff --git a/app-sci/hmmer/files/digest-hmmer-2.3.1 b/app-sci/hmmer/files/digest-hmmer-2.3.1 new file mode 100644 index 000000000000..cf974b31646b --- /dev/null +++ b/app-sci/hmmer/files/digest-hmmer-2.3.1 @@ -0,0 +1 @@ +MD5 c724413e5761c630892506698a4716e2 hmmer-2.3.1.tar.gz 1023122 diff --git a/app-sci/hmmer/hmmer-2.3.1.ebuild b/app-sci/hmmer/hmmer-2.3.1.ebuild new file mode 100644 index 000000000000..3bf3e88eba6a --- /dev/null +++ b/app-sci/hmmer/hmmer-2.3.1.ebuild @@ -0,0 +1,39 @@ +# Copyright 1999-2003 Gentoo Technologies, Inc. +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/app-sci/hmmer/hmmer-2.3.1.ebuild,v 1.1 2003/08/28 15:04:09 sediener Exp $ + +DESCRIPTION="HMMER - Biological sequence analysis with profile HMMs" +HOMEPAGE="http://hmmer.wustl.edu/" +SRC_URI="ftp://ftp.genetics.wustl.edu/pub/eddy/hmmer/2.3.1/hmmer-2.3.1.tar.gz" +LICENSE="GPL-2" +SLOT="0" +KEYWORDS="~x86" +IUSE="" + + +src_compile() { + ./configure \ + --host=${CHOST} \ + --prefix=${D}/usr \ + --exec_prefix=${D}/usr \ + --mandir=${D}/usr/share/man || die "./configure failed" + +# econf || die + emake || die +} + +src_install() { + + dodir usr/bin + dodir usr/share/man/man1 + + einstall || die + + dodoc 00README COPYRIGHT INSTALL LICENSE NOTES Userguide.pdf + + cd squid + + dobin afetch alistat compalign compstruct revcomp seqstat seqsplit sfetch shuffle sreformat sindex weight translate + +} + |