diff options
| -rw-r--r-- | sci-biology/hmmer/files/hmmer-3.0-perl-5.16.patch | 10 |
1 files changed, 5 insertions, 5 deletions
diff --git a/sci-biology/hmmer/files/hmmer-3.0-perl-5.16.patch b/sci-biology/hmmer/files/hmmer-3.0-perl-5.16.patch index f8afd629860f..f8fa51773eb7 100644 --- a/sci-biology/hmmer/files/hmmer-3.0-perl-5.16.patch +++ b/sci-biology/hmmer/files/hmmer-3.0-perl-5.16.patch @@ -28,7 +28,7 @@ index a4dc126..b61fa7a 100755 +++ b/easel/devkit/esl-dependencies @@ -13,8 +13,8 @@ # SRE, Mon Jun 11 11:15:31 2007 - # SVN $Id: hmmer-3.0-perl-5.16.patch,v 1.4 2012/06/28 16:38:29 jlec Exp $ + # SVN $Id: hmmer-3.0-perl-5.16.patch,v 1.5 2012/06/28 16:39:03 jlec Exp $ -require "getopts.pl" -&Getopts('1afr'); @@ -43,7 +43,7 @@ index af3adf6..0cdb458 100755 +++ b/easel/devkit/sqc @@ -205,12 +205,11 @@ # SRE, Tue Aug 6 11:16:39 2002 - # SVN $Id: hmmer-3.0-perl-5.16.patch,v 1.4 2012/06/28 16:38:29 jlec Exp $ + # SVN $Id: hmmer-3.0-perl-5.16.patch,v 1.5 2012/06/28 16:39:03 jlec Exp $ -require "getopts.pl"; -require "importenv.pl"; @@ -74,7 +74,7 @@ index 9c77791..024ed34 @@ -16,9 +16,9 @@ # # SRE, Thu Mar 1 19:22:57 2007 (Janelia) - # SVN $Id: hmmer-3.0-perl-5.16.patch,v 1.4 2012/06/28 16:38:29 jlec Exp $ + # SVN $Id: hmmer-3.0-perl-5.16.patch,v 1.5 2012/06/28 16:39:03 jlec Exp $ -require "getopts.pl"; +use Getopt::Std; $have_sloccount = 1; @@ -89,7 +89,7 @@ index 757854d..a9a8902 100755 +++ b/easel/testsuite/driver_report.pl @@ -25,8 +25,8 @@ # SRE, Fri Mar 2 10:01:44 2007 (Janelia) - # SVN $Id: hmmer-3.0-perl-5.16.patch,v 1.4 2012/06/28 16:38:29 jlec Exp $ + # SVN $Id: hmmer-3.0-perl-5.16.patch,v 1.5 2012/06/28 16:39:03 jlec Exp $ -require "getopts.pl"; -&Getopts('c'); @@ -107,7 +107,7 @@ index 186a392..07026a0 @@ -10,8 +10,8 @@ # # SRE, Fri Mar 2 08:37:48 2007 [Janelia] - # SVN $Id: hmmer-3.0-perl-5.16.patch,v 1.4 2012/06/28 16:38:29 jlec Exp $ + # SVN $Id: hmmer-3.0-perl-5.16.patch,v 1.5 2012/06/28 16:39:03 jlec Exp $ -require "getopts.pl"; -&Getopts('c'); +use Getopt::Std; |