path: root/sci-chemistry/pymol/ChangeLog

# ChangeLog for sci-chemistry/pymol
# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/ChangeLog,v 1.78 2011/05/06 07:59:31 jlec Exp $

*pymol-1.4.1 (06 May 2011)

  06 May 2011; Justin Lecher <jlec@gentoo.org> +files/1.4.1-data-path.patch,
  -pymol-1.3.0.ebuild, -pymol-1.3.1_pre3924.ebuild, -pymol-1.4_beta1.ebuild,
  +pymol-1.4.1.ebuild, +files/1.4.1-shaders.patch:
  Version Bump, notified by euscan; cleaned old

  05 Apr 2011; Justin Lecher <jlec@gentoo.org> pymol-1.4_beta1.ebuild:
  Cleaned unneeded SRC_URI entries

*pymol-1.4_beta1 (04 Apr 2011)

  04 Apr 2011; Justin Lecher <jlec@gentoo.org> +files/1.4-shaders.patch,
  +files/1.4-vmd.patch, +pymol-1.4_beta1.ebuild:
  Version Bump

*pymol-1.3.1_pre3925-r1 (12 Nov 2010)

  12 Nov 2010; Justin Lecher <jlec@gentoo.org> -pymol-1.3.1_pre3925.ebuild,
  +pymol-1.3.1_pre3925-r1.ebuild:
  Fixed digests, #345151

*pymol-1.3.1_pre3925 (11 Nov 2010)

  11 Nov 2010; Justin Lecher <jlec@gentoo.org> +pymol-1.3.1_pre3925.ebuild:
  Version Bump, Python byte-compilation fix

*pymol-1.3.1_pre3924 (22 Oct 2010)

  22 Oct 2010; Justin Lecher <jlec@gentoo.org> -pymol-1.3.1_pre3923.ebuild,
  +pymol-1.3.1_pre3924.ebuild:
  Version Bump

  15 Oct 2010; Justin Lecher <jlec@gentoo.org> pymol-1.3.1_pre3923.ebuild:
  Mirroring the tarball on request of dberkholz

*pymol-1.3.1_pre3923 (13 Oct 2010)

  13 Oct 2010; Justin Lecher <jlec@gentoo.org> +pymol-1.3.1_pre3923.ebuild:
  Version Bump to pre release

  19 Sep 2010; Justin Lecher <jlec@gentoo.org> pymol-1.2.3-r1.ebuild,
  pymol-1.3.0.ebuild:
  rekeyworded for ~ppc, fixes #309007

  19 Sep 2010; Justin Lecher <jlec@gentoo.org> -pymol-0.99_rc10.ebuild,
  pymol-1.2.3-r1.ebuild, pymol-1.3.0.ebuild:
  Dropped ppc, #309007; dropped old version which doesn't work with recent
  python

  16 Sep 2010; Tomáš Chvátal <scarabeus@gentoo.org>
  pymol-0.99_rc10.ebuild, pymol-1.2.3-r1.ebuild, pymol-1.3.0.ebuild:
  virtual/glut -> media-libs/glut

  29 Jun 2010; Justin Lecher <jlec@gentoo.org> -pymol-1.2.1.ebuild:
  Removed unneeded version

  24 Jun 2010; Christoph Mende <angelos@gentoo.org> pymol-1.2.3-r1.ebuild:
  Stable on amd64 wrt bug #309007

  15 Jun 2010; Arfrever Frehtes Taifersar Arahesis <arfrever@gentoo.org>
  pymol-0.99_rc10.ebuild, pymol-1.2.1.ebuild:
  Delete deprecation warnings.

*pymol-1.3.0 (09 Jun 2010)

  09 Jun 2010; Justin Lecher <jlec@gentoo.org> +files/1.3.0-vmd.patch,
  pymol-1.2.3-r1.ebuild, +pymol-1.3.0.ebuild:
  Version Bump, fixes for usage of python.eclass

  09 Jun 2010; Justin Lecher <jlec@gentoo.org> -pymol-1.0-r1.ebuild,
  -files/pymol-1.0-r1-data-path.patch, -pymol-1.2.2.ebuild,
  -pymol-1.2.2-r2.ebuild, -pymol-1.2.2-r4.ebuild,
  -files/nosplash-gentoo.patch:
  removed old version which having problems with PYTHON ABIs stuff

  16 May 2010; Justin Lecher <jlec@gentoo.org> pymol-1.2.2-r4.ebuild,
  pymol-1.2.3-r1.ebuild:
  RESTRICT PY ABI 2.5

  23 Mar 2010; Christian Faulhammer <fauli@gentoo.org>
  pymol-1.2.3-r1.ebuild:
  stable x86, bug 309007

  11 Mar 2010; Joseph Jezak <josejx@gentoo.org> pymol-1.2.2-r4.ebuild,
  pymol-1.2.3-r1.ebuild:
  Marked ~ppc for bug #299014.

*pymol-1.2.3-r1 (22 Feb 2010)

  22 Feb 2010; Justin Lecher <jlec@gentoo.org>
  -pymol-1.2.3.ebuild, +pymol-1.2.3-r1.ebuild:
  Fix the actual revision of version 1.2.3

*pymol-1.2.3 (20 Feb 2010)

  20 Feb 2010; Justin Lecher <jlec@gentoo.org> +pymol-1.2.3.ebuild:
  Version Bump

*pymol-1.2.2-r4 (19 Feb 2010)

  19 Feb 2010; Justin Lecher <jlec@gentoo.org>
  -pymol-1.2.2-r1.ebuild, -pymol-1.2.2-r3.ebuild, +pymol-1.2.2-r4.ebuild:
  Cleaned old revisions, fixed usage of distutils.eclass at EAPI=3, multiple
  python version support

*pymol-1.2.2-r3 (18 Feb 2010)

  18 Feb 2010; Justin Lecher <jlec@gentoo.org>
  +files/1.2.2-prefix.patch, +pymol-1.2.2-r3.ebuild:
  Fixed usage of pathon eclass, EAPI=3 and PREFIX ready fixes, keyworded for
  amd64-linux & x86-linux

*pymol-1.2.2-r2 (10 Feb 2010)

  10 Feb 2010; Justin Lecher <jlec@gentoo.org>
  +files/1.2.2-data-path.patch, +pymol-1.2.2-r2.ebuild:
  Fixing PYMOL_DATA again per 304259

  06 Feb 2010; Peter Volkov <pva@gentoo.org> pymol-1.2.1.ebuild,
  pymol-1.2.2.ebuild, pymol-1.2.2-r1.ebuild:
  added missed inherit eutils, bug #303693, thank Christian Becke for
  report.

*pymol-1.2.2-r1 (01 Feb 2010)

  01 Feb 2010; Justin Lecher <jlec@gentoo.org>
  +pymol-1.2.2-r1.ebuild, +files/pymol-1.2.2-vmd.patch, metadata.xml:
  vmd and numpy added to IUSE
  apbs plugin support now depends on sci-chemistry/pymol-apbs-plugin

  01 Feb 2010; Justin Lecher <jlec@gentoo.org> pymol-1.2.1.ebuild,
  pymol-1.2.2.ebuild:
  We don't install the splash window until we have a gentoo community
  contribution, fixes bug 299020

  31 Jan 2010; Justin Lecher <jlec@gentoo.org>
  -files/1.1/pymol-1.1-r2-data-path.patch,
  -files/1.1/pymol-1.1-r2-shaders.patch, -files/1.1/apbs-070604.patch.bz2,
  -files/1.1/nosplash-gentoo.patch:
  Cleanup of forgotten files, fixes bug 274865
  Added myself as maintainer

  31 Jan 2010; Justin Lecher <jlec@gentoo.org> pymol-1.2.1.ebuild,
  pymol-1.2.2.ebuild, metadata.xml:
  Needs media-libs/freetype:2, fixes bug 299019

  13 Jan 2010; Diego E. Pettenò <flameeyes@gentoo.org> pymol-1.2.2.ebuild:
  Fix path to patch, bug #300399, thanks to Priit Laes for reporting and
  jlec for warning me.

*pymol-1.2.2 (30 Dec 2009)

  30 Dec 2009; Diego E. Pettenò <flameeyes@gentoo.org> pymol-1.2.1.ebuild,
  +pymol-1.2.2.ebuild, +files/pymol-1.2.2-shaders.patch:
  Make 1.2.1 not use live subversion, bump to version 1.2.2. Thanks to
  Justin Lecher who provided the updated ebuilds. Closes bug #282503.

  03 Oct 2009; Petteri Räty <betelgeuse@gentoo.org> -pymol-1.1-r2.ebuild:
  Remove old version with built_with_use. Fixes bug #285463.

  09 Sep 2009; Markus Meier <maekke@gentoo.org> pymol-1.2.1.ebuild:
  amd64/x86 stable, bug #283639

  02 Aug 2009; Jeff Gardner <je_fro@gentoo.org>
  +files/1.2.1/nosplash-gentoo.patch, pymol-1.2.1.ebuild:
  Fix nosplash patch

*pymol-1.2.1 (02 Aug 2009)

  02 Aug 2009; Jeff Gardner <je_fro@gentoo.org> +pymol-1.2.1.ebuild,
  +files/1.2.1/pymol-1.2.1-data-path.patch,
  +files/1.2.1/pymol-1.2.1-shaders.patch:
  New version, works with python 2.6, closes bug #269119. Many thanks to
  Justin Lecher for doing the work, and fauli for a kick in the pants :)

  06 May 2009; Markus Meier <maekke@gentoo.org> pymol-1.1-r2.ebuild:
  amd64/x86 stable, bug #250903

  16 Apr 2009; Sébastien Fabbro <bicatali@gentoo.org>
  pymol-0.99_rc10.ebuild, pymol-1.1-r2.ebuild:
  Proxying for jlec: removing numeric dependencies

  19 Dec 2008; Jeff Gardner <je_fro@gentoo.org> ChangeLog:
  Rename patches

*pymol-1.1-r2 (19 Dec 2008)

  19 Dec 2008; Jeff Gardner <je_fro@gentoo.org> -pymol-1.1-r1.ebuild,
  +pymol-1.1-r2.ebuild:
  Bump to fix compilation and use moved svn repository. Thanks to jlec on
  IRC.

  17 Aug 2008; Jeff Gardner <je_fro@gentoo.org>
  files/1.1/apbs-070604.patch.bz2:
  Fix patch

*pymol-1.1-r1 (13 Aug 2008)

  13 Aug 2008; Jeff Gardner <je_fro@gentoo.org>
  +files/1.1/pymol-1.1-r1-shaders.patch, +files/1.1/nosplash-gentoo.patch,
  +files/1.1/pymol-1.1-r1-data-path.patch, +files/1.1/apbs-070604.patch.bz2,
  +pymol-1.1-r1.ebuild:
  Version bump, thanks to jschmitz and hodak for the kick in the pants :)

  02 Aug 2007; Jeff Gardner <je_fro@gentoo.org> pymol-0.99_rc10.ebuild:
  Fix ESVN_REPO_URI wrt bug #187462. Thanks to Michael Mysinger.

  11 Jul 2007; Jeff Gardner <je_fro@gentoo.org> pymol-1.0-r1.ebuild:
  Fix svn path wrt bug 184948. Thanks to Rene Meier.

  04 Jul 2007; Jeff Gardner <je_fro@gentoo.org> ChangeLog:
  Updating Manifest.

  04 Jul 2007; Jeff Gardner <je_fro@gentoo.org>
  -files/pymol-0.99_rc6-data-path.patch, -pymol-0.99_rc6-r2.ebuild:
  Removing unneeded files.

  04 Jul 2007; Christoph Mende <angelos@gentoo.org> pymol-0.99_rc10.ebuild:
  Stable on amd64 wrt bug #183879

  03 Jul 2007; Jeff Gardner <je_fro@gentoo.org>
  -files/pymol-0.99_rc8-data-path.patch:
  Removed unneeded file.

*pymol-1.0-r1 (03 Jul 2007)

  03 Jul 2007; Jeff Gardner <je_fro@gentoo.org>
  +files/pymol-1.0-r1-data-path.patch, -files/header_order.patch,
  -files/pymol-gentoo.diff, -files/setup.py-gentoo.patch,
  -files/setup2.py-gentoo.patch, -pymol-0.98.ebuild, -pymol-0.99_rc8.ebuild,
  pymol-0.99_rc10.ebuild, +pymol-1.0-r1.ebuild:
  Adding 1.0 release, changed LICENCE to pymol for the last 2 releases, and
  cleaned up old files.

  02 Jul 2007; Christian Faulhammer <opfer@gentoo.org>
  pymol-0.99_rc10.ebuild:
  stable x86, bug 183879

  02 Jul 2007; Lars Weiler <pylon@gentoo.org> pymol-0.99_rc10.ebuild:
  Stable on ppc; bug #183879.

  14 Jun 2007; Jeff Gardner <je_fro@gentoo.org> pymol-0.99_rc10.ebuild:
  Removing dev-python/numeric dependency wrt bug #181653.

*pymol-0.99_rc10 (06 Jun 2007)

  06 Jun 2007; Jeff Gardner <je_fro@gentoo.org>
  +files/pymol-0.99_rc10-data-path.patch, +pymol-0.99_rc10.ebuild:
  Adding pymol-0.99_rc10 which now depends on virtual/glut instead of
  media-libs/glut.

  01 Jun 2007; nixnut <nixnut@gentoo.org> pymol-0.99_rc6-r2.ebuild:
  Stable on ppc wrt bug 176831

  16 May 2007; Steve Dibb <beandog@gentoo.org> pymol-0.99_rc6-r2.ebuild:
  amd64 stable, bug 176831

  07 May 2007; Raúl Porcel <armin76@gentoo.org> pymol-0.99_rc6-r2.ebuild:
  x86 stable wrt #176831

  04 May 2007; Jeff Gardner <je_fro@gentoo.org>
  +files/pymol-0.99_rc8-data-path.patch:
  Adding the forgotten pymol-0.99_rc8-data-path.patch.

*pymol-0.99_rc8 (02 May 2007)

  02 May 2007; Jeff Gardner <je_fro@gentoo.org> +pymol-0.99_rc8.ebuild:
  Version bump to pymol-0.99_rc8, big thanks to hodak at ncsu.

  10 Feb 2007; Steve Dibb <beandog@gentoo.org> pymol-0.98.ebuild:
  amd64 stable, bug 165712

  07 Jan 2007; Danny van Dyk <kugelfang@gentoo.org> -pymol-0.97.ebuild,
  -pymol-0.99_rc6.ebuild, -pymol-0.99_rc6-r1.ebuild:
  QA: Removed unused versions.

  22 Oct 2006; Olivier Fisette <ribosome@gentoo.org> pymol-0.98.ebuild:
  Backporting Tkinter fix to the stable branch.

  22 Oct 2006; Olivier Fisette <ribosome@gentoo.org>
  pymol-0.99_rc6-r2.ebuild:
  Added build-time Python Tkinter dependency check.

  20 Sep 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
  (#148281) Change herd to sci-chemistry from sci.

  19 Sep 2006; Donnie Berkholz <dberkholz@gentoo.org>; pymol-0.98.ebuild,
  pymol-0.99_rc6.ebuild, pymol-0.99_rc6-r1.ebuild, pymol-0.99_rc6-r2.ebuild:
  Switch dep back to media-libs/glut from virtual/glut, pymol works really
  poorly with freeglut. You get messages about being unable to acquire a
  direct rendering context (i.e., no accelerated 3D).

*pymol-0.99_rc6-r2 (26 May 2006)

  26 May 2006; Olivier Fisette <ribosome@gentoo.org>
  +pymol-0.99_rc6-r2.ebuild:
  Moved path variable declarations from the wrapper to an env.d file
  (necessary for Python scripting).

*pymol-0.99_rc6-r1 (16 Mar 2006)

  16 Mar 2006; Olivier Fisette <ribosome@gentoo.org>
  +files/pymol-0.99_rc6-data-path.patch, pymol-0.99_rc6.ebuild,
  +pymol-0.99_rc6-r1.ebuild:
  Put the 0.99 series back in the testing branch. This has not been tested for
  30 days, and is buggy. (It was commited straight to stable.) Fixed
  references to shared data in the mutagenesis wizard and other modules
  (0.99_rc6-r1) (thanks to Pierres-Yves Savard <pys@rsvs.ulaval.ca> for
  reporting).

*pymol-0.99_rc6 (07 Mar 2006)

  07 Mar 2006; Donnie Berkholz <spyderous@gentoo.org>;
  +pymol-0.99_rc6.ebuild, -pymol-0.99.ebuild:
  (#124994) Upstream doesn't understand how to tell people when an actual
  version is released, instead they silently push out a series of release
  candidates and call them all 0.99.

*pymol-0.99 (03 Mar 2006)

  03 Mar 2006; Donnie Berkholz <spyderous@gentoo.org>; +pymol-0.99.ebuild:
  (#124611) New version. Based on ebuild from hodak@nemo.physics.ncsu.edu,
  with changes to locations as suggested by upstream.

  19 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>; pymol-0.98.ebuild:
  virtual/glut, not media-libs/glut.

  13 Aug 2005; Michael Hanselmann <hansmi@gentoo.org> pymol-0.98.ebuild:
  Stable on ppc.

  25 Jun 2005; Olivier Fisette <ribosome@gentoo.org> -pymol-0.88.ebuild,
  pymol-0.98.ebuild:
  Added to x86. Removed obsolete version.

  17 Jun 2005; Michael Hanselmann <hansmi@gentoo.org> pymol-0.97.ebuild:
  Stable on ppc.

*pymol-0.98 (18 May 2005)

  18 May 2005; Olivier Fisette <ribosome@gentoo.org> -pymol-0.90.ebuild,
  -pymol-0.95.ebuild, +pymol-0.98.ebuild:
  New version: 0.98. Removed obsolete versions.

  13 May 2005; Olivier Fisette <ribosome@gentoo.org> pymol-0.97.ebuild:
  Fixed multilib issue (bug #92103).

  04 May 2005; David Holm <dholm@gentoo.org> pymol-0.97.ebuild:
  Readded to ~ppc. Please don't remove it without filing a proper bug report.

  06 Feb 2005; Simon Stelling <blubb@gentoo.org> pymol-0.97.ebuild:
  added ~amd64

*pymol-0.97 (24 Dec 2004)

  24 Dec 2004; Olivier Fisette <ribosome@gentoo.org> +metadata.xml,
  +files/header_order.patch, +files/nosplash-gentoo.patch,
  +files/pymol-gentoo.diff, +files/setup.py-gentoo.patch,
  +files/setup2.py-gentoo.patch, +pymol-0.88.ebuild, +pymol-0.90.ebuild,
  +pymol-0.95.ebuild, +pymol-0.97.ebuild:
  Moved from app-sci/pymol to sci-chemistry/pymol.

  31 Oct 2004; Olivier Fisette <ribosome@gentoo.org> pymol-0.97.ebuild:
  Added to x86.

*pymol-0.97 (26 Jul 2004)

  26 Jul 2004; Olivier Fisette <ribosome@gentoo.org> pymol-0.97.ebuild:
  Version bump suggested by Stéphane Gagné <sgagne@rsvs.ulaval.ca> (bug #58097).
  Removed header order patch since it is no longer needed.

*pymol-0.95 (20 Apr 2004)

  20 Apr 2004; Patrick Kursawe <phosphan@gentoo.org> pymol-0.95.ebuild,
  files/header_order.patch:
  Version bump. Needed a little patch and a change to the setup2.py call (if it
  does not find the modules, it will create no python.com)

  19 Apr 2004; Patrick Kursawe <phosphan@gentoo.org> pymol-0.82.ebuild,
  pymol-0.86.ebuild, pymol-0.88.ebuild, pymol-0.90.ebuild:
  Adding IUSE, cleanup

  03 Mar 2004; Peter Bienstman <pbienst@gentoo.org> pymol-0.90:
  marked stable on x86

  02 Sep 2003; Alastair Tse <liquidx@gentoo.org> pymol-0.82.ebuild,
  pymol-0.86.ebuild, pymol-0.88.ebuild, pymol-0.90.ebuild:
  moved dev-python/Numeric to dev-python/numeric

*pymol-0.90 (23 Jul 2003)

  23 Jul 2003; George Shapovalov <george@gentoo.org> pymol-0.90, files/setup.py-gentoo.patch :
  new version + fix for setup.py, (#24967)
  thanks to Ben Cornett <acornet@emory.edu> for the update

*pymol-0.88 (29 Jun 2003)

  19 Jun 2003; George Shapovalov <george@gentoo.org> pymol-0.88.ebuild, files/{digest-pymol-0.88,nosplash-gentoo.patch,setup2.py-gentoo.patch} :
  new version (#22235)
  now uses distutils for python
  thanks to Todd Geders <geders@purdue.edu> for update notification 
  and Ben Cornett <acornet@emory.edu>  for "distutilized" ebuild submission

*pymol-0.86 (05 Feb 2003)

  05 Feb 2003; George Shapovalov <george@gentoo.org> pymol-0.86.ebuild, files/digest-pymol-0.86 :
  new version, (#13531)
  removed -funroll-loops from CFLAGS

*pymol-0.82 (17 Jul 2002)

  19 Oct 2002; Daniel Ahlberg <aliz@gentoo.org> pymol-0.82.ebuild :
  Updated to mirror://sourceforge in SRC_URI.

  17 Jul 2002; George Shapovalov <george@gentoo.org> pymol-0.82.ebuild, files/digest-pymol-0.82, ChangeLog :

  Inital release,
  molecular visualization package
  
  ebuild submitted by Ben Cornett <acornet@emory.edu>