1 files changed, 0 insertions, 54 deletions
diff --git a/sci-biology/ncbi-tools++/files/respect_CXXFLAGS_configure.ac.patch b/sci-biology/ncbi-tools++/files/respect_CXXFLAGS_configure.ac.patch
deleted file mode 100644
index 89dae23ad..000000000
--- a/sci-biology/ncbi-tools++/files/respect_CXXFLAGS_configure.ac.patch
+++ /dev/null
@@ -1,54 +0,0 @@
---- trunk/c++/src/build-system/configure.ac     2012/12/21 15:12:14     56664
-+++ trunk/c++/src/build-system/configure.ac     2012/12/27 15:43:29     56694
-@@ -623,6 +623,13 @@
-  * ) AC_SUBST(PROJECTS, "\$(top_srcdir)/$with_projects") ;;
- esac
- 
-+# Check for custom optimization flags before potentially going with defaults.
-+skip_fast_flags=no
-+if test -z "${DEF_FAST_FLAGS}${FAST_CXXFLAGS}"; then
-+   case " $CFLAGS $CXXFLAGS" in
-+      *\ -O* | *\ -xO* ) skip_fast_flags=yes ;;
-+   esac
-+fi
- 
- #### Always define this
- AC_DEFINE(NCBI_CXX_TOOLKIT, 1, [This is the NCBI C++ Toolkit.])
-@@ -1431,7 +1438,7 @@
- wsrx="[[$wschars]]"
- 
- #### Flags to enable (potentially unsafe) extra optimization.
--if test -z "$DEF_FAST_FLAGS"  -o  -z "$FAST_CXXFLAGS" ; then
-+if test "$skip_fast_flags" = no -a -z "$DEF_FAST_FLAGS" ; then
-    case "$compiler:$compiler_version" in
-       GCC:2* | GCC:344 )
-         # GCC 2.9x sometimes experiences internal errors at high optimization;
-@@ -1502,8 +1509,6 @@
-         DEF_FAST_FLAGS="-O"
-         ;;
-    esac
--else
--   DEF_FAST_FLAGS="-O"
- fi
- 
- : ${FAST_CFLAGS="$DEF_FAST_FLAGS"}
-@@ -2608,9 +2613,15 @@
-          CXXFLAGS="$CXXFLAGS -O" ; fi
-       if echo " $LDFLAGS "  | grep -v "$optrx" >/dev/null ; then
-          LDFLAGS="$LDFLAGS -O" ; fi
--      FAST_CFLAGS="$NOPT_CFLAGS $FAST_CFLAGS"
--      FAST_CXXFLAGS="$NOPT_CXXFLAGS $FAST_CXXFLAGS"
--      FAST_LDFLAGS="$NOPT_LDFLAGS $FAST_LDFLAGS"
-+      if test "$skip_fast_flags" = yes ; then
-+         FAST_CFLAGS="$CFLAGS"
-+         FAST_CXXFLAGS="$CXXFLAGS"
-+         FAST_LDFLAGS="$LDFLAGS"
-+      else
-+         FAST_CFLAGS="$NOPT_CFLAGS $FAST_CFLAGS"
-+         FAST_CXXFLAGS="$NOPT_CXXFLAGS $FAST_CXXFLAGS"
-+         FAST_LDFLAGS="$NOPT_LDFLAGS $FAST_LDFLAGS"
-+      fi
-    fi
- changequote([, ])dnl
- fi
-