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author | Aaron Bauman <bman@gentoo.org> | 2020-07-23 14:36:25 -0400 |
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committer | Aaron Bauman <bman@gentoo.org> | 2020-07-23 14:36:25 -0400 |
commit | 59207df0adf0358f1b0daf22e483bb860ff79f4f (patch) | |
tree | 9a9895b5f1e1ac4988b79b1ffda92098e6571a4c | |
parent | app-emulation/libpod: Bump to version 2.0.3 (diff) | |
download | gentoo-59207df0adf0358f1b0daf22e483bb860ff79f4f.tar.gz gentoo-59207df0adf0358f1b0daf22e483bb860ff79f4f.tar.bz2 gentoo-59207df0adf0358f1b0daf22e483bb860ff79f4f.zip |
*/*: drop last-rited pkgs
Signed-off-by: Aaron Bauman <bman@gentoo.org>
-rw-r--r-- | dev-python/Numdifftools/Manifest | 1 | ||||
-rw-r--r-- | dev-python/Numdifftools/Numdifftools-0.9.17-r1.ebuild | 60 | ||||
-rw-r--r-- | dev-python/Numdifftools/metadata.xml | 12 | ||||
-rw-r--r-- | dev-python/pyscaffold/Manifest | 1 | ||||
-rw-r--r-- | dev-python/pyscaffold/metadata.xml | 8 | ||||
-rw-r--r-- | dev-python/pyscaffold/pyscaffold-2.4.4.ebuild | 57 | ||||
-rw-r--r-- | profiles/package.mask | 20 | ||||
-rw-r--r-- | sci-chemistry/relax/Manifest | 1 | ||||
-rw-r--r-- | sci-chemistry/relax/metadata.xml | 30 | ||||
-rw-r--r-- | sci-chemistry/relax/relax-4.0.0-r4.ebuild | 83 |
10 files changed, 0 insertions, 273 deletions
diff --git a/dev-python/Numdifftools/Manifest b/dev-python/Numdifftools/Manifest deleted file mode 100644 index 8e61b06d1eba..000000000000 --- a/dev-python/Numdifftools/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST numdifftools-0.9.17.zip 363422 BLAKE2B fa57ef2b9cb6dcaa669f14720f3fd1ed105f48b16549acd7bb6d7633b17cd45355022c9949a6099c3cbddc6b1a74b0f669344c4dd5e6f5ad56cc640549f4650c SHA512 acef3865861c76f0850b6f1c5ca5633f695603a7458c79569bbe887404c8490845d935693c57ea18468fe3cb7f864fe5481285f731dc933b6c0b521e3b888328 diff --git a/dev-python/Numdifftools/Numdifftools-0.9.17-r1.ebuild b/dev-python/Numdifftools/Numdifftools-0.9.17-r1.ebuild deleted file mode 100644 index 610789b9e011..000000000000 --- a/dev-python/Numdifftools/Numdifftools-0.9.17-r1.ebuild +++ /dev/null @@ -1,60 +0,0 @@ -# Copyright 1999-2020 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -PYTHON_COMPAT=( python2_7 ) - -inherit distutils-r1 - -MY_PN=numdifftools -MY_P="${MY_PN}-${PV}" - -DESCRIPTION="Solves automatic numerical differentiation problems in one or more variables" -HOMEPAGE="https://pypi.org/project/Numdifftools/ https://github.com/pbrod/numdifftools" -SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${MY_P}.zip" - -SLOT="0" -LICENSE="BSD" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="test" -RESTRICT="!test? ( test )" - -RDEPEND=" - >=dev-python/algopy-0.4[${PYTHON_USEDEP}] - || ( - dev-python/matplotlib-python2[${PYTHON_USEDEP}] - dev-python/matplotlib[${PYTHON_USEDEP}] - ) - || ( - >=dev-python/numpy-python2-1.9.0[${PYTHON_USEDEP}] - >=dev-python/numpy-1.9.0[${PYTHON_USEDEP}] - ) - dev-python/six[${PYTHON_USEDEP}] - >=sci-libs/scipy-0.8[${PYTHON_USEDEP}] - " -DEPEND=" - app-arch/unzip - >=dev-python/setuptools-0.9[${PYTHON_USEDEP}] - dev-python/setuptools_scm[${PYTHON_USEDEP}] - dev-python/pyscaffold[${PYTHON_USEDEP}] - test? ( - ${RDEPEND} - dev-python/pytest[${PYTHON_USEDEP}] - dev-python/pytest-runner[${PYTHON_USEDEP}] - )" - -S="${WORKDIR}"/${MY_P} - -python_prepare_all() { - # pulls coverage test - sed \ - -e '/tests_require/d' \ - -i setup.py || die - - distutils-r1_python_prepare_all -} - -python_test() { - esetup.py test -} diff --git a/dev-python/Numdifftools/metadata.xml b/dev-python/Numdifftools/metadata.xml deleted file mode 100644 index 0f633d69c9fd..000000000000 --- a/dev-python/Numdifftools/metadata.xml +++ /dev/null @@ -1,12 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="pypi">Numdifftools</remote-id> - <remote-id type="github">pbrod/numdifftools</remote-id> - </upstream> -</pkgmetadata> diff --git a/dev-python/pyscaffold/Manifest b/dev-python/pyscaffold/Manifest deleted file mode 100644 index ef90d3daae0e..000000000000 --- a/dev-python/pyscaffold/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST pyscaffold-2.4.4.tar.gz 110337 BLAKE2B c436cc4967cb671cca36b5b28a69ef27f486264bc39d1bbc40d745ea015f57db053fbf38d66a92b53c5f6c82a60d75ed2b114b27b9906db02c5bb6cc14de24c2 SHA512 840d205a84528410674e898d6f32a57d3e89edf71e4773a4aae38a4f1fdd883129f6f7be437c2d07fe89b58152a3b250f4a9a7125d1a6d9461673a7f22094d70 diff --git a/dev-python/pyscaffold/metadata.xml b/dev-python/pyscaffold/metadata.xml deleted file mode 100644 index ac33afdd6be7..000000000000 --- a/dev-python/pyscaffold/metadata.xml +++ /dev/null @@ -1,8 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <!--maintainer-needed--> - <upstream> - <remote-id type="pypi">PyScaffold</remote-id> - </upstream> -</pkgmetadata> diff --git a/dev-python/pyscaffold/pyscaffold-2.4.4.ebuild b/dev-python/pyscaffold/pyscaffold-2.4.4.ebuild deleted file mode 100644 index e5fcd987a5a6..000000000000 --- a/dev-python/pyscaffold/pyscaffold-2.4.4.ebuild +++ /dev/null @@ -1,57 +0,0 @@ -# Copyright 1999-2020 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -PYTHON_COMPAT=( python2_7 python3_6 ) - -inherit distutils-r1 - -MY_PN="PyScaffold" -MY_P="${MY_PN}-${PV}" - -DESCRIPTION="Tool for easily putting up the scaffold of a Python project" -HOMEPAGE="https://pypi.org/project/PyScaffold/ https://pyscaffold.readthedocs.io/en/latest/" -SRC_URI="mirror://pypi/${MY_PN:0:1}/${MY_PN}/${P}.tar.gz" - -SLOT="0" -LICENSE="BSD" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="test" -RESTRICT="!test? ( test )" - -RDEPEND=" - dev-python/six[${PYTHON_USEDEP}] -" -DEPEND="${RDEPEND} - >=dev-python/pbr-1.6[${PYTHON_USEDEP}] - dev-python/setuptools[${PYTHON_USEDEP}] - >=dev-python/setuptools_scm-1.7[${PYTHON_USEDEP}] - test? ( - dev-python/pytest[${PYTHON_USEDEP}] - ) -" - -python_prepare_all() { - sed \ - -e 's: + pytest_runner::g' \ - -i setup.py || die - - # Creates all sort of mem problem due to fetch restrictions - rm tests/test_install.py || die - - # Online tests - sed \ - -e 's:test_api_with_cookiecutter:_&:g' \ - -e 's:test_pyscaffold_keyword:_&:g' \ - -i tests/*py || die - - distutils-r1_python_prepare_all -} - -python_test() { - git config --global user.email "you@example.com" - git config --global user.name "Your Name" - - TRAVIS=False pytest -vv || die -} diff --git a/profiles/package.mask b/profiles/package.mask index 4b278c13946e..5b10e369b308 100644 --- a/profiles/package.mask +++ b/profiles/package.mask @@ -486,26 +486,6 @@ dev-tex/dot2texi # Removal in 30 days. Bug #729376. dev-python/pytest-runner -# Michał Górny <mgorny@gentoo.org> (2020-06-23) -# Python 2 only. -# -# Relax involves implementation conflicts between dependencies. Even -# if you can get past them, it requires Numdifftools, and... -# -# Numdifftools fails with modern versions of setuptools, most likely -# because it uses pyscaffold that is broken. There are newer versions -# that removed pyscaffold support but they have new dependencies that -# do not support py2 and porting them back is just not worth the effort. -# Its only revdep is relax. -# -# Pyscaffold is just broken and required only by old versions -# of Numdifftools. -# -# Removal in 30 days. Bug #704032. -dev-python/Numdifftools -dev-python/pyscaffold -sci-chemistry/relax - # Sergei Trofimovich <slyfox@gentoo.org> (2020-06-21) # virtual/libstdc++ has only one sys-libs/libstdc++-v3 provider. # Use that instead. Or even better use none of them. It's a diff --git a/sci-chemistry/relax/Manifest b/sci-chemistry/relax/Manifest deleted file mode 100644 index 449761ba3ef7..000000000000 --- a/sci-chemistry/relax/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST relax-4.0.0.src.tar.bz2 105659752 BLAKE2B ce5fc9b7f31787f2189e75a543f8ba6fe3cd59ce7382c6c0f79c419b9f71b2d09bd16685e7fed3c9e3205be531efa2a8dc1cce707e77e2386d2a9f7a71b4b0c1 SHA512 28b5ddab2c83f95d7e1a502d05b5d3c93337fece68a1fef95ec8978f61fccf24cb37528cfef27cb20d132033535f4120b23cc76a75f34f52b27df17116351f8e diff --git a/sci-chemistry/relax/metadata.xml b/sci-chemistry/relax/metadata.xml deleted file mode 100644 index 00870a633858..000000000000 --- a/sci-chemistry/relax/metadata.xml +++ /dev/null @@ -1,30 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <longdescription> - The program relax is a software package designed for the study of molecular - dynamics through the analysis of experimental NMR data. Organic molecules, - proteins, RNA, DNA, sugars, and other biomolecules are all supported. It - was originally written for the model-free analysis of protein dynamics, - though its scope has been significantly expanded. - - relax is a community driven project created by NMR spectroscopists for - NMR spectroscopists. It supports a diverse range of analyses: - - Model-free analysis - the Lipari and Szabo model-free analysis of NMR - relaxation data. - R1 and R2 - the exponential curve fitting for the calculation of the - Rx NMR relaxation rates. - NOE - the calculation of the steady-state NOE NMR relaxation data. - Consistency testing of multiple field NMR relaxation data. - RSDM - Reduced Spectral Density Mapping. - Frame order and N-state model - study of domain motions via the N-state - model and frame order dynamics theories using anisotropic - NMR parameters such as RDCs and PCSs. - Stereochemistry investigations. - </longdescription> -</pkgmetadata> diff --git a/sci-chemistry/relax/relax-4.0.0-r4.ebuild b/sci-chemistry/relax/relax-4.0.0-r4.ebuild deleted file mode 100644 index ba03dbad8454..000000000000 --- a/sci-chemistry/relax/relax-4.0.0-r4.ebuild +++ /dev/null @@ -1,83 +0,0 @@ -# Copyright 1999-2020 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -PYTHON_COMPAT=( python2_7 ) - -WX_GTK_VER="3.0" - -inherit eutils multiprocessing python-single-r1 scons-utils toolchain-funcs wxwidgets virtualx - -DESCRIPTION="Molecular dynamics by NMR data analysis" -HOMEPAGE="https://www.nmr-relax.com/" -SRC_URI="http://download.gna.org/relax/${P}.src.tar.bz2" - -SLOT="0" -LICENSE="GPL-2" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="test" -RESTRICT="!test? ( test )" - -REQUIRED_USE="${PYTHON_REQUIRED_USE}" - -RDEPEND=" - ${PYTHON_DEPS} - $(python_gen_cond_dep " - dev-python/Numdifftools[\${PYTHON_MULTI_USEDEP}] - || ( - dev-python/matplotlib-python2[\${PYTHON_MULTI_USEDEP}] - dev-python/matplotlib[\${PYTHON_MULTI_USEDEP}] - ) - || ( - dev-python/numpy-python2[\${PYTHON_MULTI_USEDEP}] - dev-python/numpy[\${PYTHON_MULTI_USEDEP}] - ) - dev-python/wxpython:${WX_GTK_VER}[\${PYTHON_MULTI_USEDEP}] - sci-chemistry/pymol[\${PYTHON_MULTI_USEDEP}] - >=sci-libs/bmrblib-1.0.3[\${PYTHON_MULTI_USEDEP}] - >=sci-libs/minfx-1.0.11[\${PYTHON_MULTI_USEDEP}] - || ( - sci-libs/scipy-python2[\${PYTHON_MULTI_USEDEP}] - sci-libs/scipy[\${PYTHON_MULTI_USEDEP}] - ) - ") - sci-chemistry/molmol - sci-chemistry/vmd - sci-visualization/grace - sci-visualization/opendx - x11-libs/wxGTK:${WX_GTK_VER}[X]" -DEPEND="${RDEPEND} - media-gfx/pngcrush - test? ( ${RDEPEND} ) - " - -pkg_setup() { - python-single-r1_pkg_setup -} - -src_prepare() { - rm -rf minfx bmrblib extern/numdifftools || die - tc-export CC - need-wxwidgets unicode -} - -src_compile() { - escons -} - -src_test() { - VIRTUALX_COMMAND="${EPYTHON} ./${PN}.py -x --traceback" - virtualmake -} - -src_install() { - dodoc README docs/{CHANGES,COMMITTERS,JOBS,relax.pdf} - - python_moduleinto ${PN} - python_domodule * - - rm ${PN} README || die - - make_wrapper ${PN}-nmr "${EPYTHON} $(python_get_sitedir)/${PN}/${PN}.py $@" -} |