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| author |   Volkmar W. Pogatzki <gentoo@pogatzki.net> | 2024-07-01 09:14:20 +0200 |
|---|---|---|
| committer |   Miroslav Šulc <fordfrog@gentoo.org> | 2024-09-01 11:56:20 +0200 |
| commit | b99f0870b03cfc15665350f9a47c3820b59a8b89 (patch) | |
| tree | f13d73e21941b460787cd43fa013afb804390ccd /sci-biology | |
| parent | dev-ruby/activejob: fix tests (diff) | |
| download | gentoo-b99f0870b03cfc15665350f9a47c3820b59a8b89.tar.gz gentoo-b99f0870b03cfc15665350f9a47c3820b59a8b89.tar.bz2 gentoo-b99f0870b03cfc15665350f9a47c3820b59a8b89.zip | |
sci-biology/amap: drop 2.2-r5
Signed-off-by: Volkmar W. Pogatzki <gentoo@pogatzki.net>
Signed-off-by: Miroslav Šulc <fordfrog@gentoo.org>
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/amap/amap-2.2-r5.ebuild | 59 |
1 files changed, 0 insertions, 59 deletions
diff --git a/sci-biology/amap/amap-2.2-r5.ebuild b/sci-biology/amap/amap-2.2-r5.ebuild deleted file mode 100644 index 949749969c27..000000000000 --- a/sci-biology/amap/amap-2.2-r5.ebuild +++ /dev/null @@ -1,59 +0,0 @@ -# Copyright 1999-2022 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -inherit java-pkg-opt-2 java-ant-2 toolchain-funcs - -MY_P=${PN}.${PV} - -DESCRIPTION="Protein multiple-alignment-based sequence annealing" -HOMEPAGE="https://wiki.gentoo.org/wiki/No_homepage" -SRC_URI="http://baboon.math.berkeley.edu/${PN}/download/${MY_P}.tar.gz" -S="${WORKDIR}/${PN}-align" - -LICENSE="GPL-2" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="java" - -RDEPEND="java? ( >=virtual/jre-1.8:* )" -BDEPEND="${RDEPEND}" - -PATCHES=( - "${FILESDIR}"/${P}-makefile.patch - "${FILESDIR}"/${P}-includes.patch -) - -src_prepare() { - default - java-pkg-opt-2_src_prepare -} - -src_configure() { - tc-export CXX -} - -src_compile() { - emake -C align - - if use java; then - pushd display >/dev/null || die - eant -Ddisplay all || die - popd >/dev/null || die - fi -} - -src_install() { - dobin align/${PN} - - dodoc align/{README,PROBCONS.README} - - insinto /usr/share/${PN} - doins -r examples - - if use java; then - java-pkg_newjar display/AmapDisplay.jar amapdisplay.jar - java-pkg_dolauncher amapdisplay --jar amapdisplay.jar - fi -} |