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path: root/sci-biology
Commit message (Expand)AuthorAgeFilesLines
* sci-biology/STAR: fix GCC 12 buildDavid Seifert2022-05-072-1/+26
* sci-biology/STAR: drop 2.5.3aDavid Seifert2022-05-073-166/+0
* sci-biology/tree-puzzle: drop unused toolchain-funcsSam James2022-04-261-2/+0
* sci-biology/GBrowse: treecleanJakov Smolić2022-04-174-155/+0
* sci-biology/plink: [QA] fix tc-get* quotingSam James2022-03-201-2/+2
* sci-biology/mrbayes: [QA] fix tc-get* quotingSam James2022-03-201-2/+2
* sci-biology/mosaik: [QA] fix tc-get* quotingSam James2022-03-201-3/+3
* sci-biology/glimmer: [QA] fix tc-get* quotingSam James2022-03-201-4/+4
* sci-biology/fasta: [QA] fix tc-get* quotingSam James2022-03-201-3/+3
* sci-biology/blat: [QA] fix tc-get* quotingSam James2022-03-201-3/+3
* sci-biology/fasta: fix broken README symlinkDavid Seifert2022-03-191-1/+1
* sci-biology/fasta: drop 36.3.5eDavid Seifert2022-03-193-154/+0
* sci-biology/fasta: add 36.3.8hDavid Seifert2022-03-193-0/+145
* sci-biology/bioperl-run: update EAPI 5 -> 8David Seifert2022-03-192-41/+33
* sci-biology/bioperl-network: update EAPI 5 -> 8David Seifert2022-03-192-31/+26
* sci-biology/bioperl: update EAPI 5 -> 8David Seifert2022-03-191-16/+13
* sci-biology/bedtools: drop 2.29.2David Seifert2022-03-193-64/+0
* sci-biology/bcftools: add 1.15David Seifert2022-03-192-0/+45
* sci-biology/samtools: add 1.15David Seifert2022-03-192-0/+48
* sci-biology/foldingathome: add version 7.6.21Andrew Ammerlaan2022-03-012-0/+139
* sci-biology/seqan: add version 3.1.0Andrew Ammerlaan2022-02-242-0/+32
* sci-biology/STAR: unbundle htslib properlyDavid Seifert2022-02-192-0/+203
* sci-biology/vcftools: add version 0.1.16Andrew Ammerlaan2022-02-192-0/+38
* sci-biology/STAR: add version 2.7.10aAndrew Ammerlaan2022-02-192-0/+42
* sci-biology/embassy-vienna: update EAPI 7 -> 8David Seifert2022-02-142-7/+10
* sci-biology/embassy-topo: update EAPI 7 -> 8David Seifert2022-02-142-7/+10
* sci-biology/embassy-structure: update EAPI 7 -> 8David Seifert2022-02-142-7/+10
* sci-biology/embassy-signature: update EAPI 7 -> 8David Seifert2022-02-142-7/+10
* sci-biology/embassy-phylipnew: update EAPI 7 -> 8David Seifert2022-02-142-7/+10
* sci-biology/embassy-mse: update EAPI 7 -> 8David Seifert2022-02-142-10/+13
* sci-biology/embassy-iprscan: update EAPI 7 -> 8David Seifert2022-02-142-7/+10
* sci-biology/embassy-hmmer: update EAPI 7 -> 8David Seifert2022-02-142-7/+10
* sci-biology/embassy-esim4: update EAPI 7 -> 8David Seifert2022-02-142-7/+10
* sci-biology/embassy-emnu: update EAPI 7 -> 8David Seifert2022-02-142-8/+11
* sci-biology/embassy-domsearch: update EAPI 7 -> 8David Seifert2022-02-142-7/+10
* sci-biology/embassy-domalign: update EAPI 7 -> 8David Seifert2022-02-142-7/+10
* sci-biology/embassy-domainatrix: update EAPI 7 -> 8David Seifert2022-02-142-7/+10
* sci-biology/embassy-clustalomega: update EAPI 7 -> 8David Seifert2022-02-142-7/+10
* sci-biology/embassy-cbstools: update EAPI 7 -> 8David Seifert2022-02-142-7/+10
* sci-biology/emboss: update EAPI 7 -> 8David Seifert2022-02-142-9/+12
* sci-biology/repeatmasker: treecleanJakov Smolić2022-02-103-67/+0
* sci-biology/repeatmasker-libraries: treecleanJakov Smolić2022-02-103-38/+0
* sci-biology/rmblast: treecleanJakov Smolić2022-02-103-57/+0
* sci-biology/tree-puzzle: fix build system and MPIDavid Seifert2022-01-292-12/+375
* sci-biology/augustus: add forgotten runtime dependencyAndrew Ammerlaan2022-01-281-0/+1
* sci-biology/augustus: add version 3.4.0Andrew Ammerlaan2022-01-272-0/+48
* sci-biology/mrbayes: add version 3.2.7Andrew Ammerlaan2022-01-273-9/+56
* sci-biology/gibbs: treecleanJakov Smolić2022-01-164-72/+0
* sci-biology/abyss: drop version 2.0.3Andrew Ammerlaan2022-01-133-76/+0
* sci-biology/abyss: add version 2.3.4Andrew Ammerlaan2022-01-132-0/+58