1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
|
Fix -Wformat warnings caused by wrong printf specifiers:
* Sensor.Riken.cc:95:61: warning: format ‘%d’ expects argument of type ‘int’, but
* argument 3 has type ‘std::vector<RAFLgene>::size_type {aka long unsigned int}’ [-Wformat=]
* fprintf(stderr, "%d RAFL EST pairs read, ", RAFLtmp.size());
--- a/src/Hits.cc
+++ b/src/Hits.cc
@@ -163,7 +163,7 @@
if (ThisHit != NULL)
for (int i=0; i<*NumHits-1; i++) ThisHit = ThisHit->Next;
- while ((read=fscanf(HitFile,"%d %d %d %lf %d %s %d %d %as\n", &deb, &fin,
+ while ((read=fscanf(HitFile,"%d %d %d %lf %d %s %d %d %ss\n", &deb, &fin,
&poids, &evalue, &phase, HitId, &HSPDeb, &HSPFin,HSP)) >= 8)
{
if (HSP) fprintf(stderr, "%s", HSP);
--- a/src/SensorPlugins/Est/Sensor.Est.cc
+++ b/src/SensorPlugins/Est/Sensor.Est.cc
@@ -1353,13 +1353,13 @@
exit(2);
}
- fprintf(fp, "vPos %d\n", vPos.size());
+ fprintf(fp, "vPos %zu\n", vPos.size());
for (int i=0; i< vPos.size();i++ )
{
fprintf(fp, "vPos %d\t%d\n",i, vPos[i]);
}
- fprintf(fp, "vESTMatch %d\n", vESTMatch.size());
+ fprintf(fp, "vESTMatch %zu\n", vESTMatch.size());
for (int i=0; i< vESTMatch.size();i++ )
{
fprintf(fp, "vESTMatch %d\t\n", vESTMatch[i]);
--- a/src/SensorPlugins/Riken/Sensor.Riken.cc
+++ b/src/SensorPlugins/Riken/Sensor.Riken.cc
@@ -92,7 +92,7 @@
- fprintf(stderr, "%d RAFL EST pairs read, ", RAFLtmp.size());
+ fprintf(stderr, "%zu RAFL EST pairs read, ", RAFLtmp.size());
sort(RAFLtmp.begin(), RAFLtmp.end(), Before);
@@ -148,7 +148,7 @@
}
}
- fprintf(stderr,"resulting %d\n",RAFL.size());
+ fprintf(stderr,"resulting %zu\n",RAFL.size());
fflush(stderr);
// for (RAFLtmpindice=0; RAFLtmpindice< (int)RAFL.size(); RAFLtmpindice++) {
--- a/src/SensorPlugins/SMachine/Sensor.SMachine.cc
+++ b/src/SensorPlugins/SMachine/Sensor.SMachine.cc
@@ -197,7 +197,7 @@
fclose(fp);
if (end ==2) {
- fprintf(stderr, "Error in SpliceMachine splice site file %s, line %d\n", name, len);
+ fprintf(stderr, "Error in SpliceMachine splice site file %s, line %zu\n", name, len);
exit(2);
}
}
--- a/src/SoTerms.cc
+++ b/src/SoTerms.cc
@@ -67,14 +67,14 @@
j++;
if (line[0] == 'i' && line[1] == 'd')
{
- i = sscanf(line, "id: %s", &value);
+ i = sscanf(line, "id: %s", value);
if (i > 0)
{
char soId[60];
char soName[60];
strcpy (soId, value );
fgets (line, MAX_LINE, fp);
- i = sscanf(line, "name: %s", &value);
+ i = sscanf(line, "name: %s", value);
strcpy (soName, value );
idToName_[to_string(soId)]=to_string(soName);
nameToId_[to_string(soName)]=to_string(soId);
|
GitWeb