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authorAndrey Kislyuk <weaver@gentoo.org>2011-09-27 17:40:02 +0000
committerAndrey Kislyuk <weaver@gentoo.org>2011-09-27 17:40:02 +0000
commit324d9164d869ebe7b166ad3bd44bd5c59d5c7355 (patch)
treeebae0a680fe548eeaae0c2d74ca7a38dceab2777 /sci-biology/allpathslg
parentFixed and keyworded for Prefix (diff)
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Fix bug 384383
Package-Manager: portage-2.2.0_alpha45/cvs/Linux x86_64
Diffstat (limited to 'sci-biology/allpathslg')
-rw-r--r--sci-biology/allpathslg/Manifest10
-rw-r--r--sci-biology/allpathslg/allpathslg-37578.ebuild3
-rw-r--r--sci-biology/allpathslg/allpathslg-38573.ebuild11
3 files changed, 16 insertions, 8 deletions
diff --git a/sci-biology/allpathslg/Manifest b/sci-biology/allpathslg/Manifest
index f4c07f7126a8..66118980ff66 100644
--- a/sci-biology/allpathslg/Manifest
+++ b/sci-biology/allpathslg/Manifest
@@ -5,14 +5,14 @@ DIST allpathslg-35725.tar.gz 2375961 RMD160 b65870041b6b96b81194cf1b9f820c523be2
DIST allpathslg-37578.tar.gz 2511464 RMD160 462febe6efc690d53feaaff9ffb118a0c7e6a134 SHA1 45ca0d5cee312ff77f2c425b6b615dbec0f4726c SHA256 b4fdb6e7cc523cdb2831562bfabdf640dc2eb89f09d626ffeb4d1de358f46056
DIST allpathslg-38573.tar.gz 2638531 RMD160 bcb7d5d0f1fb37d9418beb6a347f1a68d198bd84 SHA1 aa5240ab4a5159d4e47aebc1cb7f3d7e374c9758 SHA256 8f8a9d18371ea0e8c8927e8ca5ce7a78bd6ad667ce06a0b86e8b444e79ba7c05
EBUILD allpathslg-35725-r1.ebuild 854 RMD160 d654f8c5d2df58883552dae42c16b97f7a056a29 SHA1 1d3f4abaf5bff7afe90d8055b6a27f5e5bf58a3d SHA256 02a9ff15e8357640d58cb1c784ede41a710f67393bae4a5beba02720fdd5ea28
-EBUILD allpathslg-37578.ebuild 896 RMD160 c4c65be1dd467f64d45b9f1f840857cebef3f1c7 SHA1 6d3d86741c87422533ca0e6ebd7fdc0872d3ba97 SHA256 7f581dce54868335327d5a2585c3d5a633c26301f650944099757206d8390dbc
-EBUILD allpathslg-38573.ebuild 800 RMD160 7aeb63047516ebe16e2b17ad790ae5a2cc1582fe SHA1 389c8d3c0dc2a750d390708aa579e606a26fee1b SHA256 6c41d6b16d5301f5309b11ac2c224604e9f0c326e5b1b21b876be7db8e019daa
+EBUILD allpathslg-37578.ebuild 937 RMD160 3fe769071199765085f3e7394e090a9ac0155001 SHA1 71d27550c9b43eb8792e172c132d7029c0862502 SHA256 d8929abd4a0cb9b67a6296e069236f8a7a52278cd7449ebd8bbc62e91d20f192
+EBUILD allpathslg-38573.ebuild 903 RMD160 c611f2e24d6a2956c2aa918a718d10521ab2201c SHA1 6a5222e204a843de252816a3609bcaceb766be09 SHA256 24a3aa6d845b11ab6b1cefcb354cc108bce18efbeb7c8d6ce027fbf68543cf00
MISC ChangeLog 847 RMD160 1e6a4e40caf7f05c29e73d9d48fff73180fcd1b0 SHA1 e97e5d8e4dc75a6ba19f4f36eb88ee7555a13c14 SHA256 9ac3f877d36978e7b7690803bf423b4df349c732ef497a1b19b7f5ac0864174a
MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
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-iEYEARECAAYFAk5+dugACgkQ8xSwyhbn2OYwJwCgnfWCk1oFSsP3/wXd9G3qifCu
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-=Kq6I
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diff --git a/sci-biology/allpathslg/allpathslg-37578.ebuild b/sci-biology/allpathslg/allpathslg-37578.ebuild
index 9cd9e6382c64..acdd75931e0d 100644
--- a/sci-biology/allpathslg/allpathslg-37578.ebuild
+++ b/sci-biology/allpathslg/allpathslg-37578.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/allpathslg-37578.ebuild,v 1.2 2011/06/20 15:32:45 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/allpathslg-37578.ebuild,v 1.3 2011/09/27 17:40:02 weaver Exp $
EAPI="2"
@@ -22,6 +22,7 @@ RDEPEND=""
src_prepare() {
filter-ldflags -Wl,--as-needed
+ sed -i 's/-ggdb3//' configure.ac || die
eautoreconf
}
diff --git a/sci-biology/allpathslg/allpathslg-38573.ebuild b/sci-biology/allpathslg/allpathslg-38573.ebuild
index 71b8eb21adbc..a4e17ea399ff 100644
--- a/sci-biology/allpathslg/allpathslg-38573.ebuild
+++ b/sci-biology/allpathslg/allpathslg-38573.ebuild
@@ -1,8 +1,10 @@
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/allpathslg-38573.ebuild,v 1.1 2011/09/25 00:33:39 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/allpathslg-38573.ebuild,v 1.2 2011/09/27 17:40:02 weaver Exp $
-EAPI="2"
+EAPI=4
+
+inherit autotools flag-o-matic
DESCRIPTION="De novo assembly of whole-genome shotgun microreads"
HOMEPAGE="http://www.broadinstitute.org/science/programs/genome-biology/crd"
@@ -18,6 +20,11 @@ DEPEND="dev-libs/boost
sci-biology/vaal"
RDEPEND=""
+src_prepare() {
+ sed -i 's/-ggdb3//' configure.ac || die
+ eautoreconf
+}
+
src_install() {
einstall || die
# Provided by sci-biology/vaal