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authorAndrey Kislyuk <weaver@gentoo.org>2012-05-29 02:54:41 +0000
committerAndrey Kislyuk <weaver@gentoo.org>2012-05-29 02:54:41 +0000
commitf7da2049df14e51e04640eb3ead94f4d65a5e964 (patch)
treef5a86cc1ab07f2ae01eab8a67db023bbcf63919a /sci-biology/allpathslg
parentversion bump (diff)
downloadhistorical-f7da2049df14e51e04640eb3ead94f4d65a5e964.tar.gz
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version bump
Package-Manager: portage-2.2.0_alpha74/cvs/Linux x86_64
Diffstat (limited to 'sci-biology/allpathslg')
-rw-r--r--sci-biology/allpathslg/ChangeLog10
-rw-r--r--sci-biology/allpathslg/allpathslg-40063.ebuild34
-rw-r--r--sci-biology/allpathslg/allpathslg-41839.ebuild (renamed from sci-biology/allpathslg/allpathslg-38573.ebuild)4
3 files changed, 10 insertions, 38 deletions
diff --git a/sci-biology/allpathslg/ChangeLog b/sci-biology/allpathslg/ChangeLog
index 58b51e9efb48..f1b3747e4344 100644
--- a/sci-biology/allpathslg/ChangeLog
+++ b/sci-biology/allpathslg/ChangeLog
@@ -1,6 +1,12 @@
# ChangeLog for sci-biology/allpathslg
-# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v 1.6 2011/12/28 03:48:22 weaver Exp $
+# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v 1.7 2012/05/29 02:51:11 weaver Exp $
+
+*allpathslg-41839 (29 May 2012)
+
+ 29 May 2012; Andrey Kislyuk <weaver@gentoo.org> -allpathslg-38573.ebuild,
+ -allpathslg-40063.ebuild, +allpathslg-41839.ebuild:
+ version bump
*allpathslg-40063 (28 Dec 2011)
diff --git a/sci-biology/allpathslg/allpathslg-40063.ebuild b/sci-biology/allpathslg/allpathslg-40063.ebuild
deleted file mode 100644
index b00a62e2451a..000000000000
--- a/sci-biology/allpathslg/allpathslg-40063.ebuild
+++ /dev/null
@@ -1,34 +0,0 @@
-# Copyright 1999-2011 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/allpathslg-40063.ebuild,v 1.1 2011/12/28 03:48:22 weaver Exp $
-
-EAPI=4
-
-inherit autotools flag-o-matic
-
-DESCRIPTION="De novo assembly of whole-genome shotgun microreads"
-HOMEPAGE="http://www.broadinstitute.org/science/programs/genome-biology/crd"
-SRC_URI="ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/${P}.tar.gz"
-
-LICENSE="as-is"
-SLOT="0"
-IUSE=""
-KEYWORDS="~amd64"
-
-DEPEND="dev-libs/boost
- >=sys-devel/gcc-4.3.3
- sci-biology/vaal"
-RDEPEND=""
-
-src_prepare() {
- sed -i 's/-ggdb3//' configure.ac || die
- eautoreconf
-}
-
-src_install() {
- einstall || die
- # Provided by sci-biology/vaal
- for i in QueryLookupTable ScaffoldAccuracy MakeLookupTable Fastb ShortQueryLookup; do
- rm "${D}/usr/bin/$i" || die
- done
-}
diff --git a/sci-biology/allpathslg/allpathslg-38573.ebuild b/sci-biology/allpathslg/allpathslg-41839.ebuild
index a4e17ea399ff..9fb76e4cae4d 100644
--- a/sci-biology/allpathslg/allpathslg-38573.ebuild
+++ b/sci-biology/allpathslg/allpathslg-41839.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2011 Gentoo Foundation
+# Copyright 1999-2012 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/allpathslg-38573.ebuild,v 1.2 2011/09/27 17:40:02 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/allpathslg-41839.ebuild,v 1.1 2012/05/29 02:51:11 weaver Exp $
EAPI=4