Version bump, remove old

Package-Manager: portage-2.2.0_alpha74/cvs/Linux x86_64

3 files changed, 19 insertions, 22 deletions

diff --git a/sci-biology/allpathslg/ChangeLog b/sci-biology/allpathslg/ChangeLog
index ee976e444991..58b51e9efb48 100644
--- a/sci-biology/allpathslg/ChangeLog
+++ b/sci-biology/allpathslg/ChangeLog
@@ -1,6 +1,12 @@
 # ChangeLog for sci-biology/allpathslg
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v 1.5 2011/10/15 20:04:57 hwoarang Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v 1.6 2011/12/28 03:48:22 weaver Exp $
+
+*allpathslg-40063 (28 Dec 2011)
+
+  28 Dec 2011; Andrey Kislyuk <weaver@gentoo.org>
+  -allpathslg-35725-r1.ebuild, +allpathslg-40063.ebuild:
+  Version bump, remove old
 
   15 Oct 2011; Markos Chandras <hwoarang@gentoo.org> allpathslg-37578.ebuild:
   Stable on amd64 wrt bug #384379
diff --git a/sci-biology/allpathslg/Manifest b/sci-biology/allpathslg/Manifest
index 1afb7d81bb91..ee0ca40eb19e 100644
--- a/sci-biology/allpathslg/Manifest
+++ b/sci-biology/allpathslg/Manifest
@@ -1,28 +1,18 @@
 -----BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA512
+Hash: SHA1
 
-DIST allpathslg-35725.tar.gz 2375961 RMD160 b65870041b6b96b81194cf1b9f820c523be29121 SHA1 2a10c88dc2c313a7307a584495195c40640989f8 SHA256 992089f300ea6ae298036f0636a21e4475ac8961927f59c4b78bb2efc2c068ac
 DIST allpathslg-37578.tar.gz 2511464 RMD160 462febe6efc690d53feaaff9ffb118a0c7e6a134 SHA1 45ca0d5cee312ff77f2c425b6b615dbec0f4726c SHA256 b4fdb6e7cc523cdb2831562bfabdf640dc2eb89f09d626ffeb4d1de358f46056
 DIST allpathslg-38573.tar.gz 2638531 RMD160 bcb7d5d0f1fb37d9418beb6a347f1a68d198bd84 SHA1 aa5240ab4a5159d4e47aebc1cb7f3d7e374c9758 SHA256 8f8a9d18371ea0e8c8927e8ca5ce7a78bd6ad667ce06a0b86e8b444e79ba7c05
-EBUILD allpathslg-35725-r1.ebuild 854 RMD160 d654f8c5d2df58883552dae42c16b97f7a056a29 SHA1 1d3f4abaf5bff7afe90d8055b6a27f5e5bf58a3d SHA256 02a9ff15e8357640d58cb1c784ede41a710f67393bae4a5beba02720fdd5ea28
+DIST allpathslg-40063.tar.gz 2551220 RMD160 8bc4f79558aa6eca058f75cff1e19f6c93440fb1 SHA1 50272c4c8b11ba58aeb1f14428e6dac4f5794f6c SHA256 b018dc5212a574e8e44ccd6481479b16db2982b497ece56cb0e0aaed91df822b
 EBUILD allpathslg-37578.ebuild 938 RMD160 6bc84531f35c0ae308281f7e51437fdef07039c2 SHA1 323b42fd479529d6dbc81f8f4b562cb4eafb3cd8 SHA256 838d3a1dabcc67d986577592e8a8fa9d1f9529d1797c121dca85112702324bd0
 EBUILD allpathslg-38573.ebuild 903 RMD160 c611f2e24d6a2956c2aa918a718d10521ab2201c SHA1 6a5222e204a843de252816a3609bcaceb766be09 SHA256 24a3aa6d845b11ab6b1cefcb354cc108bce18efbeb7c8d6ce027fbf68543cf00
-MISC ChangeLog 962 RMD160 7158cb058e1a8110c453aa4211ca9eeb0d844f85 SHA1 1875f647092d533d41c34db600026056fa88dcc3 SHA256 7d715da1736ced936be03d1b0c1a37c54257f0758f6bf23e9171d05580c2e520
+EBUILD allpathslg-40063.ebuild 903 RMD160 44e373e7fa7f28b021bdcda8ec0342b3ade0ba74 SHA1 d430940d5c3b24fccabf503d67edd536369a9187 SHA256 82c8831409c964debeacd7888dd538ff84429e252a69574a7bafd318cecb2ab0
+MISC ChangeLog 1128 RMD160 6353506a26b53ece096748b0d3048ef2963a9612 SHA1 cb1188cd190eaf6dd3853eacd51b6afb29bfa281 SHA256 6155642fc737653c0061c9b97fbc15700843f8fc29ce331907501e4f5778e8cb
 MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
 -----BEGIN PGP SIGNATURE-----
-Version: GnuPG v2.0.18 (GNU/Linux)
+Version: GnuPG v1.4.11 (GNU/Linux)
 
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diff --git a/sci-biology/allpathslg/allpathslg-35725-r1.ebuild b/sci-biology/allpathslg/allpathslg-40063.ebuild
index e0d302533393..b00a62e2451a 100644
--- a/sci-biology/allpathslg/allpathslg-35725-r1.ebuild
+++ b/sci-biology/allpathslg/allpathslg-40063.ebuild
@@ -1,10 +1,10 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/allpathslg-35725-r1.ebuild,v 1.1 2011/01/27 16:23:34 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/allpathslg-40063.ebuild,v 1.1 2011/12/28 03:48:22 weaver Exp $
 
-EAPI="2"
+EAPI=4
 
-inherit autotools
+inherit autotools flag-o-matic
 
 DESCRIPTION="De novo assembly of whole-genome shotgun microreads"
 HOMEPAGE="http://www.broadinstitute.org/science/programs/genome-biology/crd"
@@ -21,6 +21,7 @@ DEPEND="dev-libs/boost
 RDEPEND=""
 
 src_prepare() {
+	sed -i 's/-ggdb3//' configure.ac || die
 	eautoreconf
 }