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authorOlivier Fisette <ribosome@gentoo.org>2005-11-07 19:53:36 +0000
committerOlivier Fisette <ribosome@gentoo.org>2005-11-07 19:53:36 +0000
commitbc9835d320261cc080721e383350d8e5abf21c2f (patch)
tree3986a3f29de182fa1bc3865e1cee95fbc288a61f /sci-biology/rebase
parentversion bump - bug #110232 (diff)
downloadhistorical-bc9835d320261cc080721e383350d8e5abf21c2f.tar.gz
historical-bc9835d320261cc080721e383350d8e5abf21c2f.tar.bz2
historical-bc9835d320261cc080721e383350d8e5abf21c2f.zip
New version
Package-Manager: portage-2.0.51.22-r3
Diffstat (limited to 'sci-biology/rebase')
-rw-r--r--sci-biology/rebase/ChangeLog7
-rw-r--r--sci-biology/rebase/Manifest2
-rw-r--r--sci-biology/rebase/files/digest-rebase-5111
-rw-r--r--sci-biology/rebase/rebase-511.ebuild41
4 files changed, 50 insertions, 1 deletions
diff --git a/sci-biology/rebase/ChangeLog b/sci-biology/rebase/ChangeLog
index 31c52fe589d6..eb77c3af423b 100644
--- a/sci-biology/rebase/ChangeLog
+++ b/sci-biology/rebase/ChangeLog
@@ -1,6 +1,11 @@
# ChangeLog for sci-biology/rebase
# Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.39 2005/10/18 01:13:07 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.40 2005/11/07 19:53:36 ribosome Exp $
+
+*rebase-511 (07 Nov 2005)
+
+ 07 Nov 2005; Olivier Fisette <ribosome@gentoo.org> +rebase-511.ebuild:
+ New version.
18 Oct 2005; Olivier Fisette <ribosome@gentoo.org> rebase-510.ebuild:
Ebuild clean-up.
diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest
index 0ecc77d8e62c..a73db1f03ae0 100644
--- a/sci-biology/rebase/Manifest
+++ b/sci-biology/rebase/Manifest
@@ -1,6 +1,8 @@
MD5 8e3a296c79e6b9747f0bc4ebed679afc rebase-510.ebuild 1202
+MD5 8e3a296c79e6b9747f0bc4ebed679afc rebase-511.ebuild 1202
MD5 69b1a343f30e72fad61432c2246b4c28 rebase-509.ebuild 1099
MD5 b1f1c9744036cdd7d756a74a110791df ChangeLog 5954
MD5 550f8d428f3e75690b43d32df6aa60cd metadata.xml 900
MD5 8b72021e3a53e0c9ab7acaf2d016637e files/digest-rebase-509 63
MD5 c9253e81b3d46b0f4226ff56b61f4313 files/digest-rebase-510 63
+MD5 de0923d154ca7a32f45ee6bb9d3a40c4 files/digest-rebase-511 63
diff --git a/sci-biology/rebase/files/digest-rebase-511 b/sci-biology/rebase/files/digest-rebase-511
new file mode 100644
index 000000000000..d8851851fd15
--- /dev/null
+++ b/sci-biology/rebase/files/digest-rebase-511
@@ -0,0 +1 @@
+MD5 6b53178dba38317b0173943213e745b2 rebase-511.tar.bz2 181327
diff --git a/sci-biology/rebase/rebase-511.ebuild b/sci-biology/rebase/rebase-511.ebuild
new file mode 100644
index 000000000000..b9f47140eb25
--- /dev/null
+++ b/sci-biology/rebase/rebase-511.ebuild
@@ -0,0 +1,41 @@
+# Copyright 1999-2005 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-511.ebuild,v 1.1 2005/11/07 19:53:36 ribosome Exp $
+
+DESCRIPTION="A restriction enzyme database"
+LICENSE="public-domain"
+HOMEPAGE="http://rebase.neb.com"
+SRC_URI="mirror://gentoo/${P}.tar.bz2"
+
+SLOT="0"
+# Minimal build keeps only the indexed files (if applicable) and the
+# documentation. The non-indexed database is not installed.
+IUSE="emboss minimal"
+KEYWORDS="~x86 ~ppc ~amd64 ~ppc-macos ~ppc64"
+
+DEPEND="emboss? ( sci-biology/emboss )"
+
+src_compile() {
+ if use emboss; then
+ echo
+ einfo "Indexing ${PN} for usage with EMBOSS."
+ mkdir REBASE
+ EMBOSS_DATA=. rebaseextract -auto -infile withrefm.${PV} \
+ -protofile proto.${PV} || die "Indexing ${PN} failed."
+ echo
+ fi
+}
+
+src_install() {
+ if ! use minimal; then
+ insinto /usr/share/${PN}
+ doins withrefm.${PV} proto.${PV} || die \
+ "Failed to install raw database."
+ fi
+ newdoc REBASE.DOC README || die "Failed to install documentation."
+ if use emboss; then
+ insinto /usr/share/EMBOSS/data/REBASE
+ doins REBASE/{embossre.enz,embossre.ref,embossre.sup} || die \
+ "Failed to install EMBOSS data files."
+ fi
+}