sci-biology/rebase: Version Bump

Package-Manager: portage-2.2.10/cvs/Linux x86_64
Manifest-Sign-Key: 0xB9D4F231BD1558AB!

3 files changed, 72 insertions, 17 deletions

diff --git a/sci-biology/rebase/ChangeLog b/sci-biology/rebase/ChangeLog
index 7b74fb58a193..03ce865977f9 100644
--- a/sci-biology/rebase/ChangeLog
+++ b/sci-biology/rebase/ChangeLog
@@ -1,6 +1,11 @@
 # ChangeLog for sci-biology/rebase
 # Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.124 2014/07/27 10:46:16 phajdan.jr Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.125 2014/07/31 08:44:34 jlec Exp $
+
+*rebase-1408 (31 Jul 2014)
+
+  31 Jul 2014; Justin Lecher <jlec@gentoo.org> +rebase-1408.ebuild:
+  Version Bump
 
   26 Jul 2014; Pawel Hajdan jr <phajdan.jr@gentoo.org> rebase-1403.ebuild:
   x86 stable wrt bug #512118
diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest
index 0056f71ac0af..6ffbb834aef8 100644
--- a/sci-biology/rebase/Manifest
+++ b/sci-biology/rebase/Manifest
@@ -1,28 +1,32 @@
 -----BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA256
+Hash: SHA512
 
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 DIST rebase-1403.tar.xz 56541864 SHA256 947f40e42fdd58f0509043c174e87dc83fb74c9348d3c40bea878c99133fd5b1 SHA512 7f9a6b4f0a5d1f79f5aa06ae87514124d4ed5472d0dda4dbe110d5a6e8bbfaabf56d01fac164f40507a62ffd1816b4675461a66a6ff56e92bfa204140430d04c WHIRLPOOL 48cc05dd873e3674dea592a4fe35454028d58bcd3e334fd88ca89b30d2ba741db9086885a358779ab6f592c81e0aa8b77afa21917ec4176898d6351a49372a55
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diff --git a/sci-biology/rebase/rebase-1408.ebuild b/sci-biology/rebase/rebase-1408.ebuild
new file mode 100644
index 000000000000..e21898a25ab9
--- /dev/null
+++ b/sci-biology/rebase/rebase-1408.ebuild
@@ -0,0 +1,46 @@
+# Copyright 1999-2014 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-1408.ebuild,v 1.1 2014/07/31 08:44:34 jlec Exp $
+
+EAPI=5
+
+MY_PV=${PV#1}
+
+DESCRIPTION="A restriction enzyme database"
+HOMEPAGE="http://rebase.neb.com"
+SRC_URI="http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz"
+
+SLOT="0"
+LICENSE="public-domain"
+KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris"
+IUSE="emboss minimal"
+
+RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )"
+DEPEND="${RDEPEND}"
+
+RESTRICT="binchecks strip"
+
+src_compile() {
+	if use emboss; then
+		echo; einfo "Indexing Rebase for usage with EMBOSS."
+		mkdir REBASE || die
+		EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \
+				-protofile proto.${MY_PV} -equivalences \
+				|| die "Indexing Rebase failed."
+		echo
+	fi
+}
+
+src_install() {
+	if ! use minimal; then
+		insinto /usr/share/${PN}
+		doins withrefm.${MY_PV} proto.${MY_PV}
+	fi
+	newdoc REBASE.DOC README
+	if use emboss; then
+		insinto /usr/share/EMBOSS/data/REBASE
+		doins REBASE/embossre.{enz,ref,sup}
+		insinto /usr/share/EMBOSS/data
+		doins REBASE/embossre.equ
+	fi
+}