summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorJustin Lecher <jlec@gentoo.org>2012-11-05 11:22:50 +0000
committerJustin Lecher <jlec@gentoo.org>2012-11-05 11:22:50 +0000
commit88218ae58330853aeece992e622b636fe3ab4269 (patch)
tree891d46656d7aac13bd3d7261f02e53e1c6679a6c /sci-biology
parentStable for amd64, wrt bug #441382 (diff)
downloadhistorical-88218ae58330853aeece992e622b636fe3ab4269.tar.gz
historical-88218ae58330853aeece992e622b636fe3ab4269.tar.bz2
historical-88218ae58330853aeece992e622b636fe3ab4269.zip
sci-biology/ncbi-tools++: Correct patch naming again
Package-Manager: portage-2.2.0_alpha142/cvs/Linux x86_64 Manifest-Sign-Key: 0x70EB7916
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/ncbi-tools++/ChangeLog6
-rw-r--r--sci-biology/ncbi-tools++/Manifest13
-rw-r--r--sci-biology/ncbi-tools++/ncbi-tools++-0.2010.06.15-r1.ebuild14
3 files changed, 18 insertions, 15 deletions
diff --git a/sci-biology/ncbi-tools++/ChangeLog b/sci-biology/ncbi-tools++/ChangeLog
index 770fa4e1ae43..99b5d325ec06 100644
--- a/sci-biology/ncbi-tools++/ChangeLog
+++ b/sci-biology/ncbi-tools++/ChangeLog
@@ -1,6 +1,10 @@
# ChangeLog for sci-biology/ncbi-tools++
# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools++/ChangeLog,v 1.25 2012/11/03 09:21:42 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools++/ChangeLog,v 1.26 2012/11/05 11:22:49 jlec Exp $
+
+ 05 Nov 2012; Justin Lecher <jlec@gentoo.org>
+ ncbi-tools++-0.2010.06.15-r1.ebuild:
+ Correct patch naming again
03 Nov 2012; Justin Lecher <jlec@gentoo.org>
ncbi-tools++-0.2010.06.15-r1.ebuild:
diff --git a/sci-biology/ncbi-tools++/Manifest b/sci-biology/ncbi-tools++/Manifest
index 3b7cb702304e..0690aa9a58fe 100644
--- a/sci-biology/ncbi-tools++/Manifest
+++ b/sci-biology/ncbi-tools++/Manifest
@@ -1,5 +1,5 @@
-----BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA512
+Hash: SHA256
AUX ncbi-tools++-2009.05.15-asneeded.patch 3620 SHA256 71a4b2040417a9bfaa7254b5c6668d09ec69f5836a372f1b2bbc938f41ff7657 SHA512 a0f093d687d140084fdb4b7f3a255b12c739ca78e622d3e559f380a0b82a3046508c674fb1240ebbddebfb3c1e61444fa899171fa29e1b8dd16787be5ce56d00 WHIRLPOOL e4f55fe8fea98fdac2405b21606c232c9e9ecbaadc254cdb4fd65f09e2b481a8cd22e06fe023d1101a0d53e2fe0ad37962fd85df62b3a65b3e489fecceb5b531
AUX ncbi-tools++-2009.05.15-gcc44.patch 554 SHA256 ddc2379ff636851e1bb4fb601930ee926c396819e06812b1ba76da001255d5c6 SHA512 1d802c0a8ab81937b1394befb193686a7d1a1936e1b690d1c4b71d04ee1f7acc72a6bc66a04d635c4e90b67393adb50a762b28b7c89cbc269708c48738bacf5d WHIRLPOOL f5fc692e6c9b06cd4d18fd82f407d9a936d729bbf01ead00b9b4fbe1a6d9efba9a0e0e0d0ebd0a0c188fe271dc3b5ed5002b3e82a196bbad7fbbcaa998236213
@@ -7,17 +7,16 @@ AUX ncbi-tools++-2010.06.15-gcc46.patch 2304 SHA256 ef20fbecab4c7223dd52855015b8
AUX ncbi-tools++-2010.06.15-gcc47.patch 21561 SHA256 2c13cc731bbcf8edff6159e9fd9c91ef7f91b840b645f4f15670f457ea03cf92 SHA512 2ac2078e9993c76eb1bbaca32a208ea711fb03ca35545b7e51ed81221ff5455edad52dac257663caae34858131c64c17a16bd1632dafab81efaf69758efbba45 WHIRLPOOL 71fdb7621a0edb843ac644e058a538dd4ee10cf610a70dd7061d8a2eb40118891f7983293dceaa2950b0e360a024a486d2a043ea409888e33d36fd78735dfdeb
AUX ncbi-tools++-2010.06.15-glibc-214.patch 836 SHA256 e8a6054fef2a25c594f626e773a990c9399a17210f1fee4ddcdc7e181ac8d6d8 SHA512 19e3cb1e8758d5d074404758a9c590623d08aa9de1758b90bdb6eb1375fee6657302efde9d2e832b7e03bea1361d7ab56663da1c8114198b3060ffe71b8ee4b7 WHIRLPOOL 24486f8b068defbfa5415b724f1e99521400610c62e05cac787bb87195729ec8390b5394f6a03790da9d8b72dbd2222dca71b3c8d4c71004fcca6554a8ed0fa8
AUX ncbi-tools++-2010.06.15-libpng15.patch 1241 SHA256 123e85198251ea21230f8afea0cc12b4aaa04adc9f4e1d421b3c14811c4b8f53 SHA512 cbe3a32338a374e865e9158fffb28110bb5cb9f8786ff650d5997620b9f8440397c2f6c80cca8ae9beddba2d8d64ad6c2f1ec76e5cbd630581625c0859ee8e9f WHIRLPOOL 9a3e4fcc7fd5b2f6c4042b2a64b5b9e1c9823024c7e928ace2f23a5cc9e96bf9b5c115db65776119a6f9b786048309745559b421e08086379c3127d654a1e65d
-DIST ncbi-tools++-0.2010.06.15-asneeded.patch.xz 4948 SHA256 8a39b46e1ef6ddae57151c3ffbb7da952e4cb6eea0f76a4ac74de981d88cb873 SHA512 40b805c2cb9525c4f108a86502dde22b52edf8705a6ee02aab8ddc248383ef5843b4840dd97364d0f40c37d5947dd9dd56906edcd55be7cb0647cf7231298b97 WHIRLPOOL b7bb1f2438f66c9a7ecc2eed8ddce326634a2f661f240d5e4ed1d08cf4b947a0c1b5ccf192a855f225ff06ba6f059ccff3fdecb80887c4b657a50b2f3f891235
DIST ncbi-tools++-2010.06.15-asneeded.patch.xz 4948 SHA256 8a39b46e1ef6ddae57151c3ffbb7da952e4cb6eea0f76a4ac74de981d88cb873 SHA512 40b805c2cb9525c4f108a86502dde22b52edf8705a6ee02aab8ddc248383ef5843b4840dd97364d0f40c37d5947dd9dd56906edcd55be7cb0647cf7231298b97 WHIRLPOOL b7bb1f2438f66c9a7ecc2eed8ddce326634a2f661f240d5e4ed1d08cf4b947a0c1b5ccf192a855f225ff06ba6f059ccff3fdecb80887c4b657a50b2f3f891235
DIST ncbi_cxx--Jun_15_2010.tar.gz 17297248 SHA256 eb24230a9afe9bcf3c52aa6d5d9545dca04649a2569a1bb832ace54aec9d3c54 SHA512 070d1be4ef1a2e337586947c942827a29d511023c32745154868fa1aef349efb9313c9e838feb1bfc98fbb1ee9195a17d018a5fd93a2d0dc478f88bc8f3fdbbe WHIRLPOOL e40d0a9efd81b71b28ab6ce899c2333c071e09e5f17817cf0800a9a9b19778f60f3c079a1b41901c3ecddf46b50c3d0a39b89bbe2585b6e966e8d58e281c986c
-EBUILD ncbi-tools++-0.2010.06.15-r1.ebuild 2084 SHA256 c2015d9c5ce59881cde396a6e74ad285457fd794f1ac3c2727e81c7eac3fc6ea SHA512 e9b43fad6c4db2cb8d507e23d5004730fd7c6342e06d2f658af03de70b1eacf3a2ad0d730865a14536f6263be9d6704670924be35b1619a2db9159f17b223e70 WHIRLPOOL f1f85742a970143e578fed487a7bcdb7d9eb3867338d22a4521cd4dfc5a7318d5425eee301988511517a41fe6dddb6acb5de4665d52c4fe8f3a697716a57b55e
+EBUILD ncbi-tools++-0.2010.06.15-r1.ebuild 2084 SHA256 461066fa3a58b405da4a5e1d9d608b9e776df9d8812ddfb0d7ed59ed4d4a174c SHA512 3046de70015b5b1ba92130cd74819e07dc25d179017d70d453b331f7c5c990a8f51a3e5e497f7167f7d0aba0b7bd0b0afbcb7dd3f23b7566e19a172bea13d893 WHIRLPOOL e20cf77da61159a4933092ad506ad0940cd6bbbc41210c47e31db1760ddb93013820b2bd7eaf8ca63bd38854685e0d8d6d5b3adadffcd5e6459df4aa956aa500
EBUILD ncbi-tools++-2010.06.15-r1.ebuild 2022 SHA256 924a0701da3f950084a6ad6af75a0cee76bdc0dd141b358ccaaea76d4352ae0b SHA512 2c612d2798214ae8a2b12f8ffb5a3402958be51b48c3183ce3da7008e0742d2a96a1db3e314a1dd81afcf65098290ae3689d0726a3f94df04ec87f7ddb7c8e53 WHIRLPOOL b65de96a03747593b6c30393bf029cf6aedd8d7c3f5f22e816acc03cb3e4d768e2685d9194fc4348812dc621d43da616e939654874dc41ba64b333fb10b0e502
-MISC ChangeLog 4931 SHA256 a7df6e0840076be8ab0c50260785f8002a94893b7ca890b75d69e7f27a39a3e7 SHA512 470a8fb77875c821d0a88697c4eaec97caf82ce45b3d4442ce0198e3820164a300d71f7e4e1a8f460d2a819ff2c066e45a57626056bd102d52df71b480f7812f WHIRLPOOL 621f57f3721ca0d1f443ea9f601f0b7b724f1c58efcf2145627cea57d5925543d402b9a2715b2ed39e43f8505914951a1353efcf210cea274c1d73c65628a386
+MISC ChangeLog 5047 SHA256 360cc5c1c001274e231f1e257298389a9c8c051495d7e327f22bc2abfe98d3ef SHA512 3f0246e643495192e3898b43d4fa5792d2b0d497e1912651b9bf3b8e5d3f13d552a704e2bb11575be83261a83e33a4853a55c31327fab523ae5b28dc9cf3801e WHIRLPOOL 2754c88acf3d38c5aa3787140c4bdb45de5ef5ce654c48c9500deba50464586b024ec214239220ba1cf87a77a0c19fbf60b2afe58dc564768c95879cc221ad03
MISC metadata.xml 259 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110 SHA512 c3aea4d69d75075af0108a03b7e109cfed6a1fe324f8ccbda3d4e5ca8a5070f1b24ddeb46b64787e10fd22252d867abcee1f31316d602f7e32fe3c990ae60d74 WHIRLPOOL e50da2f26fd4c908446d22da3edb595d60e61d72def374be46440358802a211fc34045b7ad970c4f94b57f7b17ff24cfe64dc94254fea20e047f1fbbbcae0c64
-----BEGIN PGP SIGNATURE-----
Version: GnuPG v2.0.19 (GNU/Linux)
-iEYEAREKAAYFAlCU4icACgkQgAnW8HDreRbLaACeM7uAquak0PhWUdiwhVLixOhy
-ZZEAn0mxmX0Hj8yedQY95gBtcOGTO6pw
-=YiaL
+iEYEAREIAAYFAlCXoYoACgkQgAnW8HDreRbVhwCZATPJQJzsC6iS89UOL+x5CRoH
+MAEAoIN2rMJ/xqLDoUILQn1uVDiJ1Edw
+=ZFaj
-----END PGP SIGNATURE-----
diff --git a/sci-biology/ncbi-tools++/ncbi-tools++-0.2010.06.15-r1.ebuild b/sci-biology/ncbi-tools++/ncbi-tools++-0.2010.06.15-r1.ebuild
index 0f0a7014b069..85c77951486d 100644
--- a/sci-biology/ncbi-tools++/ncbi-tools++-0.2010.06.15-r1.ebuild
+++ b/sci-biology/ncbi-tools++/ncbi-tools++-0.2010.06.15-r1.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2012 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools++/ncbi-tools++-0.2010.06.15-r1.ebuild,v 1.2 2012/11/03 09:21:42 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools++/ncbi-tools++-0.2010.06.15-r1.ebuild,v 1.3 2012/11/05 11:22:49 jlec Exp $
EAPI="3"
@@ -14,7 +14,7 @@ DESCRIPTION="NCBI C++ Toolkit, including NCBI BLAST+"
HOMEPAGE="http://www.ncbi.nlm.nih.gov/books/bv.fcgi?rid=toolkit"
SRC_URI="
ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools++/${MY_Y}/${MY_TAG}/${MY_P}.tar.gz
- http://dev.gentoo.org/~jlec/distfiles/${PN}-${PV%0.}-asneeded.patch.xz"
+ http://dev.gentoo.org/~jlec/distfiles/${PN}-${PV#0.}-asneeded.patch.xz"
LICENSE="public-domain"
SLOT="0"
@@ -35,11 +35,11 @@ src_prepare() {
-e '/sed/ s/\([gO]\[0-9\]\)\*/\1\\+/' \
src/build-system/configure || die
epatch \
- "${FILESDIR}"/${PN}-${PV%0.}-gcc46.patch \
- "${FILESDIR}"/${PN}-${PV%0.}-gcc47.patch \
- "${WORKDIR}"/${PN}-${PV%0.}-asneeded.patch \
- "${FILESDIR}"/${PN}-${PV%0.}-libpng15.patch \
- "${FILESDIR}"/${PN}-${PV%0.}-glibc-214.patch
+ "${FILESDIR}"/${PN}-${PV#0.}-gcc46.patch \
+ "${FILESDIR}"/${PN}-${PV#0.}-gcc47.patch \
+ "${WORKDIR}"/${PN}-${PV#0.}-asneeded.patch \
+ "${FILESDIR}"/${PN}-${PV#0.}-libpng15.patch \
+ "${FILESDIR}"/${PN}-${PV#0.}-glibc-214.patch
use prefix && append-ldflags -Wl,-rpath,"${EPREFIX}/usr/$(get_libdir)/${PN}"
}