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| author |   Andrey Kislyuk <weaver@gentoo.org> | 2009-06-21 15:29:37 +0000 |
|---|---|---|
| committer | Andrey Kislyuk <weaver@gentoo.org> | 2009-06-21 15:29:37 +0000 |
| commit | e13412c02b95f33cfcfab05cd81a00c86ee3f931 (patch) | |
| tree | 8bfd3dc15c544c637b7125562bc4caa484a0079b /sci-biology | |
| parent | Version bump (diff) | |
| download | historical-e13412c02b95f33cfcfab05cd81a00c86ee3f931.tar.gz historical-e13412c02b95f33cfcfab05cd81a00c86ee3f931.tar.bz2 historical-e13412c02b95f33cfcfab05cd81a00c86ee3f931.zip | |
Version bump
Package-Manager: portage-2.2_rc30/cvs/Linux x86_64
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/hmmer/ChangeLog | 8 | ||||
| -rw-r--r-- | sci-biology/hmmer/Manifest | 6 | ||||
| -rw-r--r-- | sci-biology/hmmer/hmmer-3.0_beta1.ebuild (renamed from sci-biology/hmmer/hmmer-3.0_alpha2.ebuild) | 10 |
3 files changed, 16 insertions, 8 deletions
diff --git a/sci-biology/hmmer/ChangeLog b/sci-biology/hmmer/ChangeLog index a0aafa690784..0e5456890f45 100644 --- a/sci-biology/hmmer/ChangeLog +++ b/sci-biology/hmmer/ChangeLog @@ -1,6 +1,12 @@ # ChangeLog for sci-biology/hmmer # Copyright 2000-2009 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/hmmer/ChangeLog,v 1.24 2009/05/02 06:08:27 weaver Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/hmmer/ChangeLog,v 1.25 2009/06/21 15:29:37 weaver Exp $ + +*hmmer-3.0_beta1 (21 Jun 2009) + + 21 Jun 2009; Andrey Kislyuk <weaver@gentoo.org> -hmmer-3.0_alpha2.ebuild, + +hmmer-3.0_beta1.ebuild: + Version bump *hmmer-3.0_alpha2 (02 May 2009) diff --git a/sci-biology/hmmer/Manifest b/sci-biology/hmmer/Manifest index 7bb7479e6dcb..7d7047f68df5 100644 --- a/sci-biology/hmmer/Manifest +++ b/sci-biology/hmmer/Manifest @@ -1,7 +1,7 @@ DIST hmmer-2.3.2.tar.gz 1024933 RMD160 4bf25fc71f332849c76b0a05bca24e88241cee67 SHA1 aa34cb97cbc43ff3bd92dd111ba5677298fe2d40 SHA256 d20e1779fcdff34ab4e986ea74a6c4ac5c5f01da2993b14e92c94d2f076828b4 -DIST hmmer-3.0a2.tar.gz 24280323 RMD160 f62316a7b9c1b3f4e8c8f7ac123a14ed027dcc86 SHA1 498dbb22f4a1cf257aa2eb238c85cd8701e6622d SHA256 335c04bf4d8523b0228afc33d331654c451e09233a23f1ae0a441047261410e4 +DIST hmmer-3.0b1.tar.gz 26698922 RMD160 7f931cae7f8f58cef911c454a7666b5e07387543 SHA1 05cee814ba95436a23dc2c0477af47243e49dc00 SHA256 e739ce2f4e9ff3c6a1dc3dd58f63244dc09391fdb94b2ec77dc9fb1b8bf43416 EBUILD hmmer-2.3.2-r1.ebuild 1158 RMD160 b7e130b6b8ea46f1c2b8ecc4073820ef5ee429e9 SHA1 9da503dfe5df93dabe896d4911e0a180c824dba9 SHA256 7b1c363372b53e63da3ee7edb04bec7b8dee6606bf936205b32aaca780215bac EBUILD hmmer-2.3.2-r2.ebuild 1158 RMD160 12e1bc9bbef0d97b86bf4cabf40803ca28add539 SHA1 fdb710ae9b4f534342bc9798ba6334434e29bb7f SHA256 e637aada0386e9de663ae00dbe0af1a60c68d197c096d2f8a8b9991556e548da -EBUILD hmmer-3.0_alpha2.ebuild 934 RMD160 63ff3d6ee88f49486127eb3242f91ad98e7a8f92 SHA1 8efd13cbca4ec00caefd0c5100dfad5a29137abd SHA256 9cc2cb1d187f4e1aee46080c5dfc7db0102d8c7296ce80b9391503990c4ccc3d -MISC ChangeLog 3810 RMD160 a6e56cc7b22f48d47dbc42e1ce8c25013069365d SHA1 a9e84d43720cc509d35c480a6628ce7637864451 SHA256 efd99d2e395eb671dd2b8be16feef0782c7f10f45c4396013799a84419a8c6ac +EBUILD hmmer-3.0_beta1.ebuild 991 RMD160 f6d36973a44918e0c895aaee8a6e28b2e34126ab SHA1 22d024d17abdbb41b9c34121fc727faa2024eb6b SHA256 dcfb8eba4142e3a25cb4c72c414c072fd027b688a4f7b43ec9069c948096535e +MISC ChangeLog 3961 RMD160 6876694e7748d5207bff5f08accc7bca44a7a91b SHA1 41d87cf055d52e1b41297b8bcf5e97e83fa8b626 SHA256 046cbea2b723143b3b066b7b50d3abc6e775d757b98bf18151c25476ec35a548 MISC metadata.xml 277 RMD160 a018c1e9848781266ea1b6f0f6637de4f4883ca4 SHA1 62f5832f9fbeed814bae04f46e6a4815ce8e27fa SHA256 1faaa440fc96892d78af96f5450e6931f482410380abcbb5d608138c29799eb4 diff --git a/sci-biology/hmmer/hmmer-3.0_alpha2.ebuild b/sci-biology/hmmer/hmmer-3.0_beta1.ebuild index 71bc940be6b8..6fcfa4359ba2 100644 --- a/sci-biology/hmmer/hmmer-3.0_alpha2.ebuild +++ b/sci-biology/hmmer/hmmer-3.0_beta1.ebuild @@ -1,10 +1,10 @@ # Copyright 1999-2009 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/hmmer/hmmer-3.0_alpha2.ebuild,v 1.1 2009/05/02 06:08:27 weaver Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/hmmer/hmmer-3.0_beta1.ebuild,v 1.1 2009/06/21 15:29:37 weaver Exp $ EAPI="2" -MY_P="hmmer-3.0a2" +MY_P="hmmer-3.0b1" DESCRIPTION="Sequence analysis using profile hidden Markov models" HOMEPAGE="http://hmmer.janelia.org/" @@ -15,16 +15,18 @@ SLOT="0" IUSE="sse mpi threads" # gsl KEYWORDS="~amd64 ~x86" +# NB: compile failure with mpi, disabling temporarily # gsl? ( sci-libs/gsl ) -DEPEND="mpi? ( virtual/mpi )" +# mpi? ( virtual/mpi ) +DEPEND="" RDEPEND="${DEPEND}" S="${WORKDIR}/${MY_P}" src_configure() { econf $(use_enable sse) \ - $(use_enable mpi) \ $(use_enable threads) || die +# $(use_enable mpi) \ # $(use_with gsl) || die } |