diff options
| -rw-r--r-- | sci-biology/allpathslg/ChangeLog | 5 | ||||
| -rw-r--r-- | sci-biology/allpathslg/Manifest | 22 | ||||
| -rw-r--r-- | sci-biology/allpathslg/allpathslg-37578.ebuild | 36 |
3 files changed, 9 insertions, 54 deletions
diff --git a/sci-biology/allpathslg/ChangeLog b/sci-biology/allpathslg/ChangeLog index f62aeb7d0592..bd1154e01376 100644 --- a/sci-biology/allpathslg/ChangeLog +++ b/sci-biology/allpathslg/ChangeLog @@ -1,6 +1,9 @@ # ChangeLog for sci-biology/allpathslg # Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v 1.12 2013/02/20 15:56:10 ago Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v 1.13 2013/02/20 16:09:03 jlec Exp $ + + 20 Feb 2013; Justin Lecher <jlec@gentoo.org> -allpathslg-37578.ebuild: + Drop old 20 Feb 2013; Agostino Sarubbo <ago@gentoo.org> allpathslg-42337.ebuild: Stable for amd64, wrt bug #458106 diff --git a/sci-biology/allpathslg/Manifest b/sci-biology/allpathslg/Manifest index 763e77a4bd94..d4332856a9e6 100644 --- a/sci-biology/allpathslg/Manifest +++ b/sci-biology/allpathslg/Manifest @@ -1,26 +1,14 @@ -----BEGIN PGP SIGNED MESSAGE----- -Hash: SHA512 +Hash: 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a/sci-biology/allpathslg/allpathslg-37578.ebuild +++ /dev/null @@ -1,36 +0,0 @@ -# Copyright 1999-2012 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/allpathslg-37578.ebuild,v 1.6 2012/12/14 09:57:17 ulm Exp $ - -EAPI="2" - -inherit autotools flag-o-matic - -DESCRIPTION="De novo assembly of whole-genome shotgun microreads" -HOMEPAGE="http://www.broadinstitute.org/science/programs/genome-biology/crd" -SRC_URI="ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/${P}.tar.gz" - -LICENSE="MIT" -SLOT="0" -IUSE="" -KEYWORDS="amd64" - -DEPEND=" - dev-libs/boost - !sci-biology/allpaths - sci-biology/vaal" -RDEPEND="" - -src_prepare() { - filter-ldflags -Wl,--as-needed - sed -i 's/-ggdb3//' configure.ac || die - eautoreconf -} - -src_install() { - einstall || die - # Provided by sci-biology/vaal - for i in QueryLookupTable ScaffoldAccuracy MakeLookupTable Fastb ShortQueryLookup; do - rm "${D}/usr/bin/$i" || die - done -} |