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Diffstat (limited to 'sci-biology/mira/mira-3.0.0.ebuild')
| -rw-r--r-- | sci-biology/mira/mira-3.0.0.ebuild | 51 |
1 files changed, 0 insertions, 51 deletions
diff --git a/sci-biology/mira/mira-3.0.0.ebuild b/sci-biology/mira/mira-3.0.0.ebuild deleted file mode 100644 index 3e2c7b2a8e47..000000000000 --- a/sci-biology/mira/mira-3.0.0.ebuild +++ /dev/null @@ -1,51 +0,0 @@ -# Copyright 1999-2010 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/mira/mira-3.0.0.ebuild,v 1.5 2010/06/28 21:32:20 jlec Exp $ - -EAPI="3" - -MIRA_3RDPARTY_PV="31-01-2010" - -inherit autotools base multilib - -DESCRIPTION="Whole Genome Shotgun and EST Sequence Assembler for Sanger, 454 and Solexa / Illumina" -HOMEPAGE="http://www.chevreux.org/projects_mira.html" -SRC_URI="mirror://sourceforge/mira-assembler/${P}.tar.bz2 - mirror://sourceforge/mira-assembler/mira_3rdparty_${MIRA_3RDPARTY_PV}.tar.bz2" - -LICENSE="GPL-2" -SLOT="0" -IUSE="doc" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~x86-macos" - -CDEPEND=">=dev-libs/boost-1.35.0" -DEPEND="${CDEPEND} - dev-libs/expat - doc? ( >=app-text/texlive-core-2009 )" -RDEPEND="${CDEPEND}" - -src_prepare() { - find -name 'configure*' -or -name 'Makefile*' | xargs sed -i 's/flex++/flex -+/' || die - epatch "${FILESDIR}"/${P}-asneeded.patch - AT_M4DIR="config/m4" eautoreconf -} - -src_configure() { - econf \ - --with-boost="${EPREFIX}"/usr/$(get_libdir) \ - --with-boost-libdir="${EPREFIX}"/usr/$(get_libdir) \ - --with-boost-thread=boost_thread-mt -} - -src_compile() { - base_src_compile - if use doc; then emake -C doc clean docs || die; fi -} - -src_install() { - einstall || die - dodoc AUTHORS GETTING_STARTED NEWS README* HELP_WANTED THANKS INSTALL - find doc/docs/man -type f | xargs doman - find doc/docs/texinfo -type f | xargs doinfo - dobin "${WORKDIR}"/3rdparty/{sff_extract,*.pl} -} |