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-rw-r--r--sci-chemistry/vmd/files/digest-vmd-1.8.53
-rw-r--r--sci-chemistry/vmd/files/vmd-1.8.5-config-gentoo.patch103
2 files changed, 106 insertions, 0 deletions
diff --git a/sci-chemistry/vmd/files/digest-vmd-1.8.5 b/sci-chemistry/vmd/files/digest-vmd-1.8.5
new file mode 100644
index 000000000000..f6aa451ff4ad
--- /dev/null
+++ b/sci-chemistry/vmd/files/digest-vmd-1.8.5
@@ -0,0 +1,3 @@
+MD5 a8f28ef4a69717a9ed348825f659836b vmd-1.8.5.src.tar.gz 17106456
+RMD160 70087a42ae20180f2ed18cc4492764ed24b19aa4 vmd-1.8.5.src.tar.gz 17106456
+SHA256 208d7829e4fc2744e30c778e1485b96d35018b1e0dbc02388630ce4a2733c30b vmd-1.8.5.src.tar.gz 17106456
diff --git a/sci-chemistry/vmd/files/vmd-1.8.5-config-gentoo.patch b/sci-chemistry/vmd/files/vmd-1.8.5-config-gentoo.patch
new file mode 100644
index 000000000000..55a22ed9862f
--- /dev/null
+++ b/sci-chemistry/vmd/files/vmd-1.8.5-config-gentoo.patch
@@ -0,0 +1,103 @@
+diff -Naur vmd-1.8.5/configure vmd-1.8.5-new/configure
+--- vmd-1.8.5/configure 2006-08-25 16:39:51.000000000 -0400
++++ vmd-1.8.5-new/configure 2006-08-26 09:57:30.000000000 -0400
+@@ -13,10 +13,10 @@
+ $install_name = "vmd";
+
+ # Directory where VMD startup script is installed, should be in users' paths.
+-$install_bin_dir="/usr/local/bin";
++$install_bin_dir="gentoo-bindir";
+
+ # Directory where VMD files and executables are installed
+-$install_library_dir="/usr/local/lib/$install_name";
++$install_library_dir="gentoo-libdir/$install_name";
+
+
+ # optionally override hard-coded defaults above with environment variables
+@@ -121,29 +121,6 @@
+ # Configure script code begins here
+ ############################################################################
+
+-## Test for existence of a properly compiled plugin tree
+-if (!(-e "plugins")) {
+- print "\n";
+- print "VMD plugin directory not found.\n";
+- print "Please compile the VMD plugins and do 'make distrib' to copy them\n";
+- print "into a 'plugins' directory linked or located in this directory.\n";
+- print "Be sure your PLUGINDIR environment variable is set before running\n";
+- print "'make distrib' in the plugin build area.\n";
+- print "\n";
+- die "Halting configuration until VMD plugins are built.\n";
+-} else {
+- if (!(-e "plugins/include/vmdplugin.h")) {
+- print "\n";
+- print "VMD plugin include files or directory not found.\n";
+- print "Please compile the VMD plugins and do 'make distrib' to copy them\n";
+- print "into a 'plugins' directory linked or located in this directory.\n";
+- print "Be sure your PLUGINDIR environment variable is set before running\n";
+- print "'make distrib' in the plugin build area.\n";
+- print "\n";
+- die "Halting configuration until VMD plugins are built.\n";
+- }
+-}
+-
+ #################### Parse command line options ###########
+ # list of allowed architectures
+ @archlist=('IRIX6', 'IRIX6_64', 'FREEBSD', 'HPUX11', 'AIX4', 'AIX5', 'AIX5_64', 'LINUX', 'LINUXALPHA', 'LINUXAMD64', 'LINUXIA64', 'LINUXPPC', 'MACOSX', 'MACOSXX86', 'TRU64', 'SOLARIS2', 'SOLARIS2_64', 'SOLARISX86', 'SOLARISX86_64', 'WIN32', 'WIN64');
+@@ -409,8 +386,8 @@
+
+ ################ Plugin options
+ #
+-$plugin_dir = "../plugins";
+-$molfile_dir = "$plugin_dir/$config_arch/molfile";
++$plugin_dir = "gentoo-plugindir";
++$molfile_dir = "$plugin_dir/compile/lib_LINUX/molfile";
+ $plugin_include = "-I$plugin_dir/include -I$molfile_dir";
+ $plugin_library = "-L$molfile_dir";
+ $plugin_libs = "-lmolfile_plugin";
+@@ -510,8 +487,8 @@
+ ################ FLTK GUI
+ $fltk_defines = "-DVMDGUI -DVMDFLTK";
+ $fltk_dir = "$vmd_library_dir/fltk";
+-$fltk_include = "-I$fltk_dir/include";
+-$fltk_library = "-L$fltk_dir/$config_arch";
++$fltk_include = "-Igentoo-fltk-include";
++$fltk_library = "-Lgentoo-fltk-libs";
+ $fltk_libs = "-lfltk -lX11";
+ #@fltk_cc = ('forms_ui.c');
+ @fltk_ccpp = ( 'ColorFltkMenu.C',
+@@ -859,9 +836,9 @@
+ ###################
+ $python_defines = "-DVMDPYTHON";
+ $python_dir = "$vmd_library_dir/python";
+-$python_include = "-I$python_dir/lib_$config_arch/include/python2.2";
+-$python_library = "-L$python_dir/lib_$config_arch/lib/python2.2/config";
+-$python_libs = "-lpython2.2 -lpthread";
++$python_include = "-Igentoo-python-include";
++$python_library = "-Lgentoo-python-lib";
++$python_libs = "-lgentoo-python-link -lpthread";
+ @python_h = ('PythonTextInterp.h',
+ 'VMDTkinterMenu.h',
+ 'py_commands.h',
+@@ -1441,8 +1418,8 @@
+ $opengl_libs = "-lGL -lGLU";
+ # $opengl_libs = "-L/usr/X11R6/lib -lGL -lGLU -lXext -lX11";
+
+- $arch_cc = "gcc";
+- $arch_ccpp = "g++";
++ $arch_cc = "gentoo-gcc";
++ $arch_ccpp = "gentoo-g++";
+ # test hack to statically link libstd++
+ # $arch_ccpp = "gcc";
+ $arch_depend_flag = "-MM";
+@@ -1451,8 +1428,8 @@
+ $arch_shcppopts = "-fPIC";
+ $arch_shldopts = "";
+
+- $arch_opt_flag = "-m32 -fno-for-scope -Wno-deprecated -Wall -O3";
+- $arch_copts = "-m32 -Wall -O3";
++ $arch_opt_flag = "gentoo-cflags";
++ $arch_copts = "gentoo-cflags";
+
+ if ($config_static) {
+ $arch_lopts = "-static";