scikits-image added

Signed-off-by: Igor Ulyanov <disinbox@gmail.com>

3 files changed, 82 insertions, 0 deletions

diff --git a/sci-libs/scikits_image/Manifest b/sci-libs/scikits_image/Manifest
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--- /dev/null
+++ b/sci-libs/scikits_image/Manifest
@@ -0,0 +1,3 @@
+DIST scikit-image-0.15.0.tar.gz 32288867 BLAKE2B 48198e1c6e4213ddc15674b9adc52238bf37bc3bd221e4adeb2f308c420671c08fc6d2e56dcfc471d8ff2b90faf750f5c49de607648138be88f50ae15b9acd21 SHA512 9d0be54ddd564c0f28eae979b6f348011f7b38c8811f70ad460330905e706fe145dd6a30b502d15126450148fdbb3f54a271227d46e2d078030054ad00f35bc3
+EBUILD scikits_image-0.15.0.ebuild 1761 BLAKE2B e80c46e921db842fa12e546a4633ee0ab8138fd063ecb53dc74ebd506e60e2ffed3110e73ebc974787c2583366db742aabf719c995f4fa42a91ffb1f3df50d8d SHA512 aec59061f62c4a742c564f9840e20aee2a194c707c33fb34b68a5467dc89d935380e4728dc0004672b9cfa862f83021484b89e8ff685046dd609177b595f17bf
+MISC metadata.xml 834 BLAKE2B d6ed9731e0bfffb39fb127b1ccaa9d449e7cedc4038a5a4a915624fadad131d39df0d1d7123951539074758095d35c1b9730bb4a3da2278b02630903645eb769 SHA512 1c615479bc22c8c66b4f7a2189e38c69f9b8722f051c68473439069ef89598f0505dbd94fe06cbe56a07e41a1a6552f4d8d666703676ef9a165dbcf462e09e40
diff --git a/sci-libs/scikits_image/metadata.xml b/sci-libs/scikits_image/metadata.xml
new file mode 100644
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+++ b/sci-libs/scikits_image/metadata.xml
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+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <maintainer type="project">
+    <email>sci@gentoo.org</email>
+    <name>Gentoo Science Project</name>
+  </maintainer>
+  <longdescription lang="en">
+  This SciKit (toolkit for SciPy) includes useful image processing
+  algorithms for use with Python and NumPy. While SciPy’s ndimage
+  provides low-level manipulation, scikits.image centres around
+  algorithms and applications.
+</longdescription>
+  <use>
+    <flag name="freeimage">Enable support for image i/o via
+  <pkg>media-libs/freeimage</pkg></flag>
+    <flag name="pyamg">Enable support for algebraic solvers via <pkg>dev-python/pyamg</pkg></flag>
+  </use>
+  <upstream>
+    <remote-id type="pypi">scikit-image</remote-id>
+  </upstream>
+</pkgmetadata>
diff --git a/sci-libs/scikits_image/scikits_image-0.15.0.ebuild b/sci-libs/scikits_image/scikits_image-0.15.0.ebuild
new file mode 100644
index 0000000..9a6348f
--- /dev/null
+++ b/sci-libs/scikits_image/scikits_image-0.15.0.ebuild
@@ -0,0 +1,57 @@
+# Copyright 1999-2019 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+
+PYTHON_COMPAT=( python3_{5,6,7} )
+
+inherit distutils-r1 eutils virtualx
+
+MYPN="${PN/scikits_/scikit-}"
+MYP="${MYPN}-${PV}"
+
+DESCRIPTION="Image processing routines for SciPy"
+HOMEPAGE="https://scikit-image.org/"
+SRC_URI="mirror://pypi/${PN:0:1}/${MYPN}/${MYP}.tar.gz"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE="doc freeimage pyamg test"
+
+RDEPEND="
+	dev-python/matplotlib[${PYTHON_USEDEP}]
+	dev-python/networkx[${PYTHON_USEDEP}]
+	dev-python/numpy[${PYTHON_USEDEP}]
+	dev-python/pillow[${PYTHON_USEDEP}]
+	dev-python/pywavelets[${PYTHON_USEDEP}]
+	dev-python/six[${PYTHON_USEDEP}]
+	sci-libs/scipy[sparse,${PYTHON_USEDEP}]
+	freeimage? ( media-libs/freeimage )
+	pyamg? ( dev-python/pyamg[${PYTHON_USEDEP}] )"
+DEPEND="${RDEPEND}
+	>=dev-python/cython-0.23[${PYTHON_USEDEP}]
+	dev-python/setuptools[${PYTHON_USEDEP}]
+	test? (	dev-python/nose[${PYTHON_USEDEP}] )"
+
+S="${WORKDIR}/${MYP}"
+
+DOCS=( CONTRIBUTORS.txt RELEASE.txt )
+
+python_test() {
+	distutils_install_for_testing
+	cd "${TEST_DIR}" || die "no ${TEST_DIR} available"
+	echo "backend : Agg" > matplotlibrc || die
+	#echo "backend.qt4 : PyQt4" >> matplotlibrc || die
+	#echo "backend.qt4 : PySide" >> matplotlibrc || die
+	MPLCONFIGDIR=. virtx nosetests --exe -v skimage || die
+}
+
+pkg_postinst() {
+	optfeature "FITS io capability" dev-python/astropy
+	optfeature "GTK" dev-python/pygtk
+	optfeature "Parallel computation" dev-python/dask
+	# not in portage yet
+	#optfeature "io plugin providing a wide variety of formats, including specialized formats using in medical imaging." dev-python/simpleitk
+	#optfeature "io plugin providing most standard formats" dev-python/imread
+}